Treponema phagedenis: FUT81_03460
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Entry
FUT81_03460 CDS
T06342
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tphg
Treponema phagedenis
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tphg03016
]
FUT81_03460 (truB)
Enzymes [BR:
tphg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FUT81_03460 (truB)
Transfer RNA biogenesis [BR:
tphg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FUT81_03460 (truB)
Prokaryotic type
FUT81_03460 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Trp_oprn_chp
Motif
Other DBs
NCBI-ProteinID:
QEK08589
LinkDB
All DBs
Position
complement(763205..764209)
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AA seq
334 aa
AA seq
DB search
MRKIEQDLIIPFAKQAGMTSFDSLWQVKHALKTKKLGHTGTLDSFADGLLVLLSGKLTRL
AGRITDFDKTYITRMEFGKQTDTLDPEGEVIDMKELPQVEAFFSVLDSFTGVITQIPPLY
SAVKIKGQRASDRMRQGEAVVLKERSITIYSLRVVSLESDGKTADPSAFASGALLSAATL
EVSCSKGTYIRSLVRDIAAAAGSCAFVSALRRTAVGPFMLAEAAGYDKLVEFGKTESEVN
QSRTQLLYEEIKAASKTLDTKTAKKLGFPVVEINRAFVKNFFHGQKIQKEWFNTVPASSG
SRLIAVFSCDNCIGLIKNSGNSFNYDTVFQIEGM
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattgaacaggatttgattattccgtttgcaaaacaagccggaatgaccagc
tttgactcgctttggcaagttaaacatgcactaaaaacaaaaaaacttggacataccgga
accttagacagctttgcagacggtttgcttgttttgctttcaggaaaactgactcggctt
gcagggaggattacggattttgataaaacgtacataacccgtatggaattcggaaaacaa
accgatacgcttgaccctgaaggcgaagttatcgacatgaaggaattaccgcaggtagaa
gctttcttctcggttttggatagctttaccggagtaataacacaaattccgcctttgtac
tccgccgtaaaaataaaggggcagcgcgcttccgatagaatgcggcaaggagaagcggtg
gtgctaaaagagcggagcattactatttattcgttacgggtggtaagtttggaatctgac
ggaaaaacagctgatccttcggcgtttgcgtccggagcgctgctttccgctgctacactg
gaggtttcctgctcaaagggaacctatatccgctcattggtgcgtgatattgcggcggca
gcaggctcgtgcgcctttgtatccgctttgcgcagaaccgctgtcggcccttttatgctc
gcggaagcggcggggtatgataagttggttgaattcggaaaaacggaaagcgaagtaaat
cagtcccgtactcaattactatatgaagaaatcaaagccgcttccaaaactcttgataca
aaaactgcgaaaaaacttggcttccccgtagttgaaatcaatcgtgcgtttgttaaaaat
ttctttcatggacagaaaatacaaaaagaatggtttaacacagtgcctgcatcatcgggt
agccgattaatagctgttttttcttgtgataattgtataggtttgattaaaaacagcggc
aactcttttaattatgacacggtttttcagatagaggggatgtaa
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