Treponema phagedenis: FUT81_04385
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Entry
FUT81_04385 CDS
T06342
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tphg
Treponema phagedenis
Pathway
tphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FUT81_04385 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tphg03019
]
FUT81_04385 (pcnB)
Enzymes [BR:
tphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FUT81_04385 (pcnB)
Messenger RNA biogenesis [BR:
tphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FUT81_04385 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEK08757
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All DBs
Position
970029..971228
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AA seq
399 aa
AA seq
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MRVRYSQDAQGNKIKRALVYTASEHTISPKNIDAEALKIIQTLHSAGYEGFIVGGAVRDL
LLGRIPKDFDIATSAEPSKIKKLFRNSRIIGKRFRLVHIFYGPKIYEISTFRSIEDGAVG
NKFGTIEEDVQRRDFTINALYYDPIKNLIIDYVGGLHDLRKNRLRAIIPLKNIFSEDPVR
MLRAIKYSILAKAKIPFLLSCRLHRDTSLLEYCSPSRLTEELNKIFHSGYSKPIIERLLH
YELFLYLQPSAYSFIQDNAKFAECFLSGFEELDSLTNEGKIQRQGQALVFLLRDFINLIT
DWEGSPGEVYAFVYQECRHFVLPMNPQRIELEYAVRYCLYKGGLKIRPPRPLQPKTTPVK
RLRTRTQKGQVGKTSQLRGVHAKSSPTAKKKALSNKSEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcgttacagtcaagatgcgcaaggaaataaaataaaacgggctttggtttac
actgcatcggaacatactatttcaccgaaaaatatcgatgcggaagctttaaaaataatt
caaaccttgcacagtgccggttatgaaggttttattgtaggcggtgcagttcgagattta
cttcttggaagaattccaaaagattttgatattgctacttctgccgagccttcaaagatt
aaaaaactttttagaaattcaagaattatcggtaagcgatttcgtttagtgcatattttt
tacggtccgaaaatttacgaaatatcaacctttcgttctatagaagacggagctgtagga
aataaattcggaaccattgaagaagatgtacaacgcagagattttacgattaacgccctc
tactatgatccgattaaaaatctgattattgattatgtgggaggattgcacgatctgcgt
aaaaacagacttcgggctattattccgttaaaaaatattttttctgaagatccggtgcga
atgttgcgagccataaaatattccattcttgctaaggcaaaaatcccttttctacttagt
tgccgcctgcatcgcgacacctctttactcgaatattgttcaccttctcgattaacggag
gagcttaataaaatttttcattccggatattccaaaccgattattgagcggcttttgcat
tatgagctgtttttatatttacaaccatccgcatacagttttattcaagataatgcaaaa
ttcgccgaatgctttttgtccggttttgaagaacttgattctcttacaaacgaaggaaaa
attcagcgccaaggacaagccttagtgtttttgttacgagattttatcaatctcattacc
gattgggaaggatctccgggagaagtatacgcatttgtttatcaagaatgcagacatttt
gttttaccgatgaatcctcaacgaatagagcttgaatatgcagtccgctattgtctatat
aaaggaggcttaaaaatacgccctccacgacctttgcagcctaaaacaacaccggtaaaa
cgtcttagaacaagaactcaaaaaggccaagtcggaaaaacttctcagctaagaggagtc
catgcaaaaagctcaccaaccgccaagaaaaaagctttatcaaataaatcggaagagtag
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