Treponema phagedenis: FUT81_05890
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Entry
FUT81_05890 CDS
T06342
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tphg
Treponema phagedenis
Pathway
tphg03030
DNA replication
tphg03430
Mismatch repair
tphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FUT81_05890 (dnaE)
03430 Mismatch repair
FUT81_05890 (dnaE)
03440 Homologous recombination
FUT81_05890 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tphg03032
]
FUT81_05890 (dnaE)
03400 DNA repair and recombination proteins [BR:
tphg03400
]
FUT81_05890 (dnaE)
Enzymes [BR:
tphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FUT81_05890 (dnaE)
DNA replication proteins [BR:
tphg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FUT81_05890 (dnaE)
DNA repair and recombination proteins [BR:
tphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FUT81_05890 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEK09013
LinkDB
All DBs
Position
1296731..1300150
Genome browser
AA seq
1139 aa
AA seq
DB search
MDFVHLHVHSDYSLLDGASSIQKLVSTAKKLGQPALALTDHGNMFGVLRFQEECKKQEIK
PLIGCELYVAAKSRFDRNKQINGRNYYHLILIAKNEIGYRNLIVLSSKAYTEGMYYKPRI
DDELLQAHSEGLICLSACLAGQLPYLLLNGRKEEAEAHVRKYLDIFGDNYFIEVQNHGLA
EQKKVTPLLIEMARKLGIPMVLTNDVHYAEQKDSVAQDILLCIGMKKVRTDTNRMKFETD
QFYLKSAEEMAKLFPEYPEMMSNTLRIADMCNVEIPQPGPLLPVYKIPEEFASKDLYIRH
LVAEGLKTRYEVITDEIKKRAEYELDIIIKMDFVGYFLIVWDFINWAKNHDIPVGPGRGS
GAGSIVAYAMRITDIDPLRYKLLFERFLNPERISMPDFDVDFCFERRQEVIEYVRQKYGD
ESVGQIITFGTLKPKAAIKDVGRVLNIPLADVNMITKLMPEDPKLTFEKALTIPELVQIK
ETPEYTELFQIAEALEDSNRNTSLHAAGIVIGKTKLTDYVPLYKDSKTGKIATQFTMDLI
EQCGLVKMDFLGLKTLTLIKHTEDLIRRRGGALANFSIQNICDDDERTYKMLGEGMSAAV
FQFESKGMQGILKRAKPDKIEDLIALNALYRPGPMAFIDQFIESKFDNSKIKYPDPCLQD
ILEETYGVIVYQEQVMQVAQKIGGLSLGEADILRRAMGKKKKEVMAEWKVKFAERAVTQG
FDKKHAEEIFDILVPFAGYGFNKSHAAAYSVLAYQTAYLKANFPAEFMAANLTNEITSVD
KLPVYIEEAEKMGLTIVPPSINKSEPYFSVDKGEIIFGFLGIKGVGEQAAIDIYNERKTN
GMYKSFIDFLDRVDLHTVKKSTVEVLIKTGCFDEFDINRATLIGQYEAAMGYAAQKKEGQ
ESGQVSLFENTGIKEFSDFVFARVEDLPQKEKLRMEKDLVGFYISGHPLDEYRKIIETTA
TLDLGHLERATPEKKYLIVGMLNAIKPYTTKKGQSMAFGSFEDLHGVIDLVFFSKIWEEQ
RARFLPETVMGLIGTVDTNREEPSFLVDSYISLDELEEKSIKEVHVEVASLSMSTDKQFQ
HLRDFLLGAENGTCDVFIHIAIEDKIYIVQASSQVKVSSDDNFLSALGEQPGVLQVWKE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtacatttacacgttcattcggattattcattgctggatggagcttcttcc
attcaaaaacttgtttcaaccgcaaaaaaactcgggcagcccgcgctggcgcttaccgat
catgggaatatgttcggggtgttgcgttttcaggaagaatgcaaaaagcaggaaatcaag
ccgcttatcggctgtgaactttatgttgcggcaaaaagcaggtttgatcgtaataaacaa
ataaacggacgaaattattatcacttaatacttattgcaaaaaatgagatcggttaccgt
aatttgatagtgttatcttctaaggcgtataccgaaggcatgtattataagccgcgtatc
gatgatgaacttttgcaagcgcactcggaggggcttatctgtctttccgcttgtcttgcc
ggacagttgccgtatcttttgttaaacgggcggaaagaagaggctgaggcacatgtacgg
aagtatctggatattttcggtgataattattttattgaagtacaaaatcacgggcttgcc
gagcaaaaaaaagttacaccgctgctaattgaaatggcgcgaaagcttggcattccgatg
gtgctcaccaatgatgtacattatgcagagcaaaaagactctgttgcacaagatattttg
ctttgcatcggtatgaaaaaagtgcgtaccgatactaaccgcatgaaatttgaaaccgac
caattttatttaaaatccgcggaagaaatggcaaaactctttcccgaatatcctgaaatg
atgagcaatacgcttcgtattgcggatatgtgcaatgtagagatcccgcagccaggtccg
cttttaccggtgtataaaatcccggaagaatttgcttcaaaggatttatacatccgtcat
ctggtagcagaaggcttaaaaacacgctacgaggtaatcaccgatgaaataaaaaaacgg
gctgaatatgaacttgatatcattattaaaatggattttgtcggttactttttaattgtc
tgggactttatcaactgggcaaaaaatcacgatattcctgtcggtcctgggagaggctcc
ggggcgggttccattgttgcctatgcaatgcgtatcaccgatatagatccgctgcgttat
aaactcctttttgaacgctttttaaaccccgagcgtatttcaatgccggactttgatgtt
gatttttgcttcgaaagaagacaggaagtaattgaatatgtgcgtcaaaaatacggggac
gaaagtgtcgggcaaattattaccttcggaaccctaaagccgaaggcggcgatcaaagat
gtcggaagagttttaaacattcctttggctgatgtaaatatgataactaaactcatgcct
gaggatcctaaactcacttttgaaaaagcacttacaattcctgaactggtacaaattaaa
gaaacgcctgaatacaccgagctttttcaaattgcggaagctcttgaagattctaaccga
aacaccagtttacatgcggcgggcattgtaatcggaaaaacaaaacttacagattatgta
cctctttataaagactcaaaaaccggaaaaattgcaactcagtttaccatggatttaatt
gagcaatgcggtttggtaaaaatggattttttgggattaaaaacgttaacgcttataaaa
cacactgaagatcttatccgaagacgaggcggagcgcttgcaaatttttcaatccaaaat
atctgcgacgatgatgagcgcacgtataaaatgcttggagaaggcatgtccgctgcagtg
tttcaatttgaaagcaaggggatgcaaggcattttaaaacgggcaaaacccgataaaatt
gaagacctcatcgcattaaatgctctgtatcgccccgggccgatggcttttatcgatcag
tttattgaatcaaaatttgataactcaaaaataaaatatccggatccatgtttacaagat
attttggaagaaacatacggcgtcattgtgtatcaggaacaggttatgcaggttgcccag
aaaataggtggcctttccctaggagaagccgatattttacgccgggcaatggggaaaaaa
aagaaagaagttatggctgagtggaaggtaaaatttgccgagcgcgccgtaacgcagggg
tttgataaaaaacatgccgaagaaatatttgatattcttgttccttttgccggttacggc
tttaacaaaagccatgcagccgcatactcggttcttgcctatcaaaccgcatacttaaaa
gcaaacttccctgcggaatttatggcggcgaacctcaccaatgaaattacctcagtcgat
aaacttccggtttatattgaagaagctgaaaaaatggggcttacgattgtgccgccaagt
ataaacaaatcggaaccttattttagtgtcgataaaggagaaattattttcggcttttta
ggcattaaaggagtcggagagcaggcagcaattgatatctataacgaaagaaaaactaac
ggtatgtataaatcttttattgatttcttggatcgggtagacttacatactgtcaagaaa
tcaaccgtagaagtgcttattaaaaccggttgctttgatgaatttgacataaaccgtgca
acgttaatcggtcagtatgaagcggcaatgggctatgccgctcaaaaaaaagaaggtcaa
gaaagcggacaagtaagcctttttgaaaacaccggcattaaagaattttccgattttgtt
tttgcacgggttgaagatttgcctcaaaaagaaaaactgcgtatggaaaaagatcttgtc
gggttttatatttcagggcatccccttgatgaatatcgtaaaataatagaaacaaccgca
acattggatttaggacatttggaaagggcaacccctgaaaaaaaatacctcattgtcggc
atgctgaatgcaattaaaccatataccacaaaaaaaggtcaaagcatggcgttcggcagt
tttgaggatctgcacggagtaattgatcttgtatttttttcaaaaatatgggaagaacaa
agagctcgatttttgccagaaactgttatgggccttatcggcactgttgataccaatagg
gaagagccttcttttttagtagattcttatattagtcttgatgagttagaagaaaaatct
ataaaagaagtgcatgtagaagttgcttctctttctatgtcaaccgataaacaatttcag
cacttaagagattttttgcttggagcggagaacggtacctgcgatgtttttattcatatt
gcgattgaagataaaatatatattgtacaagcttcatcgcaggtaaaggtttcttcggat
gataattttttatcagctcttggagagcaaccgggcgtattacaggtttggaaagagtaa
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