Treponema phagedenis: FUT81_09100
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Entry
FUT81_09100 CDS
T06342
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tphg
Treponema phagedenis
Pathway
tphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FUT81_09100 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tphg03019
]
FUT81_09100 (rny)
Messenger RNA biogenesis [BR:
tphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FUT81_09100 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Ly49
UPF0767
Motif
Other DBs
NCBI-ProteinID:
QEK09574
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All DBs
Position
2024707..2026242
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AA seq
511 aa
AA seq
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MGTTILIGIILVAVGLILGWTIRWLYARFQLSASEQRAERVLQEAKKEAEAQKKDILLEA
KEQLIRERNQQERENRERRNDLQRSERRLAQKEDVLDKRLETVEKQEKQLVEREAALNER
DKNLSGEEERYRERLEEISGLTQAQARDLIISSLEAEAKHDAQALINKIEEEAHLVAEKK
ARDILVTTIQRLATDTTSDITVSTVSLPSDEMKGRIIGREGRNIRALETLTGVDIIIDDT
PEAVVISCFDPVRKEIARIALERLILDGRIHPARIEEIVQKVTREISQKIYEEGEKVLFD
LGIHDMSQEGVRALGRLYFRTSYGQNVLYHSKEVAVLAGMIAAEVGADVEIAKRGALLHD
IGKGVETDSDKNHAEIGMEIARKINEDPRVVNAVGSHHNDIEPSCVEALLVQIADAISAA
RPGARRETMDNYVKRLENLEAIAEGFPGVEKAYAIQAGRELRVLVNNEKIPDQDVKVLGR
DIAKKIENDLKYPGRIRVTLIRETRIIEYAR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgaccattttaatcggtattatccttgttgctgtcggtttaattcttggatgg
acgattcgctggttgtatgccagatttcaactatctgcttctgaacaacgtgcagagcgg
gttttacaggaggcaaaaaaagaagctgaagctcaaaagaaggatattcttcttgaggca
aaagaacaacttattcgggaaagaaatcagcaggaacgggaaaaccgcgaacgtaggaat
gatctccagcgttcggaacgccgtttagcgcaaaaagaggatgtcctcgacaagcgattg
gaaacggtggaaaagcaagaaaagcagctcgttgaacgtgaagccgcactcaatgaacgc
gataagaatttaagcggcgaagaagagcggtatcgggaaagattggaggaaatctccggt
cttacgcaggcgcaggcacgggatttgataatctcgagtcttgaagcggaagcaaaacat
gatgcgcaagctttaattaataagatagaagaagaagcacatcttgtagctgaaaaaaaa
gcgcgggacattctggtaacaactatccaaagacttgccaccgatacaacaagtgatata
acagtatcgacggttagtttaccgagcgatgagatgaagggaaggattatcgggcgagaa
gggcgtaatattcgtgcgcttgaaaccttaaccggtgtggatatcattattgatgatacg
ccggaagcggttgttatttcctgttttgaccctgtacgtaaagaaattgcgcggattgcg
cttgagcgactcatccttgacgggcgtattcaccctgcacgaatcgaagaaattgtgcaa
aaggtaacacgtgaaatatcgcaaaagatatacgaagagggtgaaaaggtgctttttgac
ttaggtattcatgacatgagtcaggaaggtgtacgggcgctcgggcggttgtactttaga
acaagctacgggcaaaatgtcctgtaccattctaaagaggttgcagtccttgcagggatg
attgccgcagaggttggcgccgatgtggaaatagcgaagcgcggtgccttgttgcatgat
atcggaaaaggtgtagaaacagattccgataaaaaccatgcggaaatcggcatggaaatt
gcacgcaaaatcaatgaagacccgcgagtggtaaatgcggtaggctcacaccataatgat
attgagccttcttgcgtggaagctttgctggtgcaaattgcggatgcgatttccgccgca
cggccgggagctcgacgcgaaacaatggacaactatgtgaagcgtttggaaaaccttgaa
gcgattgccgaaggtttccccggtgttgaaaaagcctatgcaattcaggcaggaagagaa
ttgcgagttctggtaaataatgaaaaaataccggatcaggacgtaaaagtgcttggaaga
gatattgctaaaaaaattgaaaacgatctcaaatatcccggcagaatacgcgtaaccctt
atccgtgaaaccagaattatagaatatgcacgttga
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