Treponema phagedenis: FUT81_14145
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Entry
FUT81_14145 CDS
T06342
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tphg
Treponema phagedenis
Pathway
tphg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FUT81_14145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tphg03021
]
FUT81_14145
03400 DNA repair and recombination proteins [BR:
tphg03400
]
FUT81_14145
Enzymes [BR:
tphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FUT81_14145
Transcription machinery [BR:
tphg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FUT81_14145
DNA repair and recombination proteins [BR:
tphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FUT81_14145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
QEK10456
LinkDB
All DBs
Position
complement(3135057..3136112)
Genome browser
AA seq
351 aa
AA seq
DB search
MARKNLLKGFKKPKGVDFVAEVSDESHGKFIASPFETGFGTTIGNCLRRVLLSSIQGYAI
TSVRITTYDADGVGHSISSEFESIPHVREDTLEILNNLKQIRLLLPEEEEEGAFTFEFQG
PCTITGADLEKEYQLQILSKDVHIMEMMEGAHVEFEVNVKFGRGYVPAETNEQYVEVVGT
IPLDSIFSPVLKVRYEIQPCRVGQRNDYDKLVLEIWTDGTVRPEDALAEAAKIAKDHFSI
FVNFDESVLIGEDDADEDDAKIRDLLNTKISEVDFSVRARNCLANIGVKTLGELTKISEQ
TLASTRNVGKKSLSEIQGKLQEYNLRLGMTDYSHLKDTNKLVRQKEETDEA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaaaaaccttttaaaaggattcaaaaaacccaaaggggtagattttgtagct
gaagtatcggatgaaagtcatgggaaatttattgcctccccctttgaaacaggctttgga
acaactatcggtaattgtcttagacgcgttttactttcctctattcaaggatatgcaata
acctcagtacggatcacaacctatgatgctgatggagtagggcatagcatttcaagcgaa
tttgaatccatcccgcatgttcgcgaagatacgcttgagattttaaataatctcaagcag
attcgtttattgcttccggaagaagaagaggagggtgcctttacttttgaatttcaaggt
ccctgcacaataacgggagctgatttagaaaaagaatatcagcttcagattctatcaaaa
gatgtccatattatggaaatgatggaaggggcacatgttgagtttgaagtaaacgtaaag
ttcggcagaggctatgtccccgcggaaacaaatgaacagtatgttgaagtagtggggaca
atccctttggattccatttttagcccggttttaaaagttcgctatgaaattcaaccttgt
cgagtcggacaacgtaatgactatgacaaacttgtgcttgaaatttggacagacggtact
gttcgtcccgaagatgctttagctgaagctgcgaagatcgcaaaagaccacttttcaatt
tttgtaaactttgacgaaagcgtgcttattggtgaagatgatgccgatgaagatgatgca
aaaataagagacttgcttaatacaaaaatttcagaggttgatttttccgtgcgagcaaga
aattgtctggcaaatataggtgttaaaactcttggagaattgacaaaaatatccgaacaa
acgcttgccagcaccagaaacgttggtaaaaaaagcttgagtgaaattcagggtaaatta
caagagtataatttacgtttgggaatgactgattacagtcatttaaaagatacgaataaa
ttggtaagacagaaggaagaaacagatgaagcataa
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