Treponema phagedenis: FUT81_14545
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Entry
FUT81_14545 CDS
T06342
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tphg
Treponema phagedenis
Pathway
tphg03030
DNA replication
tphg03410
Base excision repair
tphg03420
Nucleotide excision repair
tphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FUT81_14545 (polA)
03410 Base excision repair
FUT81_14545 (polA)
03420 Nucleotide excision repair
FUT81_14545 (polA)
03440 Homologous recombination
FUT81_14545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tphg03032
]
FUT81_14545 (polA)
03400 DNA repair and recombination proteins [BR:
tphg03400
]
FUT81_14545 (polA)
Enzymes [BR:
tphg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FUT81_14545 (polA)
DNA replication proteins [BR:
tphg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FUT81_14545 (polA)
DNA repair and recombination proteins [BR:
tphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FUT81_14545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FUT81_14545 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_P_Exo
Motif
Other DBs
NCBI-ProteinID:
QEK10530
LinkDB
All DBs
Position
3205558..3208386
Genome browser
AA seq
942 aa
AA seq
DB search
MKDDVVFILDAYGLIYRSYFAFVGKPLTNSTGKNISAVFGFFKSLYTILRDYEPQFFAVA
MDSRVPTFRHEMYSEYKATRDKTPEDLHAQIPIIEEILTALGITLVRKDGFEADDVIASI
AKCASADNKKAVIISSDKDLMQLIDDKITMLKPNKADAWIAFNADDVKEQWGVPPNQMLD
FLSLIGDTADNVPGVKSIGPKTAAKLLDEYGSLDGIYAHTNSLKGAMQKKIIEGKENAYF
SKKLIALEDSALEKCVLSDFACPVLDYAAAAKIFLREELPSLARQYAPNADFVKTDEAFL
VRSADPKKEKKQGANSAGANPITTSPLQEIASASGGFKKNAGNYRGITEPEELRKLIDAA
IAQGFAAFDCETTGLNPLEAELAGFSLALKAEEAFYIPVKLLPAELQSQAPQPMPLEKAV
SELARLWQQKNLTIIMHNGKFDYQAMRTAGVFEKTPCAIFDTMIAAWLLDPDRTSFSLDS
LASSLLKLQTIAYKDVVPKGKIFSDVPYEQAVAYAAEDADITLQFYEFLLPKLKEYGLFD
LFQTLEMPLLPLLAEMEIAGIFLKKEELAEFSEELGKEIIVHEREIFDIVGHEFNIASPK
QLQEVLFTELKLPTGKKTKTGYSTDTSVLEVLASEHVIPAKILEYRALTKLKSTYTDALP
ALADKNGRVHTSFIQTGTATGRLSSRDPNLQNIPIRDEAGRRIRKAFQAEKGKNLISADY
AQIELVILAHLSQDKNLVQAFQEGTDVHAATAGLIFGVPIGEVLPDMRRIAKTINFGVMY
GMSAFRLSNALRIPRRQAADFIETYFKTYSGVHIFMEELKESARRKGYVETLMGRRRYIY
AINSANKLEQAGAERVAINTPIQGSAADIVKTAMLKVQNALQAHKLQAKLLLQVHDELIC
EAPEKETETVKTLLRQEMESVVKLLVPLRVNIESGKTWGDFH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgatgttgtatttattctggatgcttatgggttgatttatcgctcgtatttt
gcttttgtggggaagccgctgacgaatagcacgggcaaaaatatttccgcggtgttcggt
ttttttaaaagtttgtatacgattttgcgagattatgaaccgcagttttttgcggttgca
atggattcgcgggtgccgacttttcggcatgagatgtattccgagtataaggcaacgcgg
gataaaacgcccgaagatttgcatgcgcagattccgattatcgaagaaatactgactgcg
ctcgggatcacgcttgtgcggaaggacggttttgaagccgatgatgtgattgcgagtatt
gccaagtgcgcttctgcggacaataaaaaggcggttattatttcgtccgataaagacctc
atgcagttaattgatgataaaataacaatgctcaaaccgaataaagctgatgcatggatt
gcgtttaatgccgatgatgtaaaagagcaatggggggtgccgccgaatcaaatgcttgat
tttctttcactcattggggataccgcggataatgtgccgggggtaaaaagtatcgggccg
aaaacggcggcaaaacttttagatgagtacggctctcttgacgggatttatgcgcacacc
aattccttaaaaggagcaatgcagaaaaaaattatcgaaggaaaggagaatgcgtatttt
tcaaaaaagttgatcgctttggaagacagtgcgcttgaaaaatgcgtgttaagcgatttt
gcctgtcccgtcttggactatgcggcagcggcaaaaatatttttgcgtgaagagttgccc
agtttggcgcggcagtatgcgcccaatgcggattttgtaaaaaccgacgaagcttttttg
gttcgatcggcggatcctaaaaaagagaaaaaacagggcgccaattctgccggagcaaat
cctataaccacttctccgttgcaggagattgcttcggcaagcggcggttttaaaaagaat
gcgggaaattatcgcggaataacggaacccgaagaattgcggaagttgattgatgcggcg
attgcgcaggggtttgccgcttttgactgtgaaacaaccggccttaatccgcttgaggca
gagcttgcgggtttttctcttgcgcttaaagcggaggaagcattttatattccggtaaaa
cttctgccggccgagctgcagtcgcaggcgccgcagccgatgccgcttgaaaaagccgtt
tcggaacttgcgcgattgtggcagcaaaaaaatcttacgataattatgcacaacggaaaa
ttcgattatcaggcaatgagaactgccggcgtatttgaaaaaacgccctgcgctattttt
gatacaatgattgcggcgtggcttttagatccggacagaacctcattcagtttggacagc
cttgcctcatcgttattaaagcttcaaacaattgcatacaaagacgttgtgccgaaagga
aagattttttccgatgtgccgtatgaacaagcggttgcctatgctgccgaagatgcggat
ataacgctacagttttatgaatttctgcttccaaaattaaaagagtatggattatttgat
ttattccaaacgctggaaatgcctttgctgccgctccttgcggaaatggaaattgccgga
atctttttaaaaaaagaagagcttgcggaattttccgaagagttggggaaggaaattatt
gtgcatgagcgggagattttcgacatagtcgggcatgaatttaatatcgcctcgcctaaa
cagttgcaggaagtattgttcaccgaactgaaactacccaccggcaaaaaaacaaaaacc
ggttattctaccgacacctcggttttggaagtgcttgcatccgagcatgttattcctgca
aaaatacttgagtaccgggctttgaccaagctaaagtcaacctataccgatgcgcttccg
gctcttgccgataaaaacggcagagtgcacacaagttttatccaaacgggaacagcaacg
gggcggctttcgagcagggatccgaatttgcaaaacattccgatacgggatgaggcgggc
agaagaatacgaaaagcttttcaggcggaaaaaggtaaaaacctgatttccgcagattat
gcgcaaatcgagctggtaattcttgcccatctttcacaagataaaaaccttgtgcaggca
tttcaggaaggaaccgatgtgcatgcggcaacagcggggctcatcttcggcgtgccgatc
ggcgaggtgcttcccgacatgcggcgtatcgcaaaaacaattaacttcggcgttatgtac
ggcatgagtgcgttcaggcttagtaatgcgctgcgtattccacgcaggcaggcggcggat
tttatcgaaacctattttaaaacttattccggtgtacatatttttatggaagagcttaaa
gaaagcgcccgccgcaaaggatatgttgaaaccctgatggggcgcaggcgttatatttac
gcaattaacagtgcgaataaactggaacaggcaggcgccgagcgggttgcaataaacaca
ccgattcaaggctctgccgccgacattgtaaaaacagcaatgctgaaagtgcaaaacgct
ttgcaagctcataaattgcaggcaaagctcttattgcaagtgcatgatgaacttatttgc
gaagctccggaaaaggaaaccgaaaccgttaaaaccctccttcggcaggaaatggaatcg
gtggtaaaactattggtgccattgcgcgtcaacattgaatccggcaaaacatggggtgat
tttcattag
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