Treponema phagedenis: FUT81_14875
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Entry
FUT81_14875 CDS
T06342
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tphg
Treponema phagedenis
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tphg03016
]
FUT81_14875
Enzymes [BR:
tphg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FUT81_14875
Transfer RNA biogenesis [BR:
tphg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FUT81_14875
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Myosin_N
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
QEK10587
LinkDB
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Position
3288294..3290144
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AA seq
616 aa
AA seq
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MKKGNPVLYKNRPALIIDEQADKFEIETENGTKRVREKDMNLLHAGTVNSLKELLSAPLP
SGNIEDALEFFEVESESFFEFAELVWGEYPASAAWAVWDATLSNPLFVCTAPNEPVKIRS
KEELEALTKKQNEKNAAEELKRQFVLALKKALQGKEIAVFDCETYAPFLQEIEALALGKT
EQSKYLKEAKIAETPESAHTVLLKTGFWTAQKNPYPARFDHSLYSSKIDIPPLKRAENIT
DLSGIPAFAIDNEGSTDPDDAISFDGKYLWIHVANPADTIEPDTKSDIDARGRGATLYAP
EGASRMLGEKAIEYFALGLTPFSCALSFKIGINNEGEIISVSIERTKIAVTRMTYRQAEE
KKDDAALKPLFEIARRNTERRHAAGAVSIEMPEVYISVDKDKTVHIREAQKFESMDMVRE
MMLLAGEAAARFAFKNAIPFQYISQPFPELPKKLPEGLAGEYKKRRAMKPRNVGTIPSIH
AALGIALYSQVTSPLRRYGDLVCHQQLLRFIDGKPLMPADDLVLRIGAADAATRNAILAE
RCSKKHWTLVYLLDNPDKIFRAIVLETVGNKAHIIIPALAYEADITVKEPLELNAEISVK
AAKIFLPKLEAHFIHV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggaaatcctgtcttatacaaaaacaggcctgcattgattatcgatgagcag
gctgataagtttgaaatcgaaaccgaaaacggaactaaaagagtgcgagaaaaagatatg
aatcttttgcatgcgggaacggtaaattctttgaaagagcttctttccgcaccgctccct
tccggaaatattgaagatgcccttgagttttttgaggtcgagtctgaatcattttttgag
tttgcggagcttgtttggggtgagtatccggcatccgccgcatgggcagtatgggatgca
acgctttccaatccgttgtttgtttgcaccgcgccgaacgagcccgtgaaaatacgcagt
aaagaagagcttgaggcacttaccaaaaaacaaaacgaaaaaaatgcggcggaagaattg
aaaaggcagtttgtacttgcattaaaaaaagctttgcaggggaaagagattgcagtcttt
gattgcgaaacctatgcgccttttttacaagagattgaagctcttgcactcggaaaaaca
gaacaatcaaaatatttgaaagaggcaaaaatagctgaaactccggaatccgctcatacg
gttttgctgaaaacaggtttttggactgcacaaaaaaatccttatcccgcccgctttgat
cattcgctgtattcttcaaaaattgacattcctcctttaaaaagagcggaaaatatcacc
gatttaagcggcatccccgcctttgccattgataatgaaggcagcaccgatcctgatgat
gcaatcagctttgacggcaaatatctttggattcatgttgcaaatcctgcggataccatt
gagccggacactaaaagcgatatcgatgcacgcggcagaggtgccacactctatgcgccc
gaaggggcttcgcgaatgctcggcgaaaaagctatcgaatactttgcgctcggtttaacg
cctttttcctgtgccctctcgtttaaaatcggaattaataacgaaggagaaataatttcc
gtcagcatcgagcgcactaaaattgcagtaacgcgtatgacttaccgacaagcggaggag
aaaaaagatgatgccgccttaaaaccgctttttgaaatagctcggcgaaacaccgaacga
aggcatgccgccggagctgtcagtatagaaatgcccgaagtgtatatctcggtagacaaa
gataaaaccgtgcatatacgagaggcgcaaaaattcgaatcaatggatatggtgcgggaa
atgatgctcctcgccggagaagcggctgcccgttttgcttttaaaaatgctattcccttt
cagtatatcagccagccgtttcccgagctaccgaaaaaacttcccgagggacttgccggc
gaatataaaaaacggcgtgcaatgaagccgcgtaatgtcggcaccattccgtccattcat
gcagcgctcgggattgccttatacagtcaggttaccagccccctgcgccggtacggcgac
cttgtctgtcatcaacaacttctgcggtttatagacggcaaaccgcttatgcccgccgac
gatcttgttcttcgtataggagctgccgatgcggcaacgcgtaacgcaattcttgccgaa
cgctgttcaaaaaaacattggacgcttgtctaccttttagataacccagataaaattttt
cgcgctatcgttctggaaactgttggcaataaggctcatatcattatccccgcacttgca
tacgaggctgacatcactgtgaaagaaccgcttgaactaaacgcggaaatttcggtaaaa
gcggcaaaaatcttccttccaaaacttgaagcacactttatacacgtgtga
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