Treponema phagedenis: FUT81_15420
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Entry
FUT81_15420 CDS
T06342
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tphg
Treponema phagedenis
Pathway
tphg03420
Nucleotide excision repair
tphg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FUT81_15420
03430 Mismatch repair
FUT81_15420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tphg03400
]
FUT81_15420
Enzymes [BR:
tphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FUT81_15420
DNA repair and recombination proteins [BR:
tphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FUT81_15420
MMR (mismatch excision repair)
Other MMR factors
FUT81_15420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C
AAA_30
DUF6777
TK
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QEK10688
LinkDB
All DBs
Position
complement(3388041..3389222)
Genome browser
AA seq
393 aa
AA seq
DB search
MSGKLYIAGAGVGKTTKIVKDAIATKHKKNLITTYTIANAEQIKNKIREQAGVIPENITV
KTWFSFLLEDGIRPYQGAKFTKRIAGISFINGQSAGCAGKQQDVYYINKDNKIYSDKISA
GVMFLDDDKSNRDNNKSLIFERLSKKYDCVYIDEVQDLVGYDLDIIARMIKYDIEVIMAG
DPRQCTYKTHYATKNKRYSNGKIEAFFKNECKNLNITIDDKSLNKTYRNCKPICDFANEI
YKDISLMSSEKEKEADHCGVFIIREEYVEQYLEKFRPVQLRCNILVKINSEYDVLNFGES
KGLEFDRVLIYPTENIWRWIFDSSIALKPGTRADFYVAITRARYSVAIVEKKIKKQCPMT
NKYITYWEPDGIIPHVNKIVEMKTITSKKLIKS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaattatatattgccggggccggggtaggaaagacaaccaaaatagttaag
gatgcgatagccacaaaacataaaaaaaatttgataactacctatacaatagctaatgct
gagcagataaaaaacaaaataagagaacaggccggagttattccggaaaacattaccgtc
aaaacatggttttcatttttacttgaagacggaataagaccctatcagggtgctaaattt
acaaaacgaatagctgggatttctttcataaacggacagagtgctggatgtgccggcaaa
cagcaagatgtatattatataaataaagataataaaatatattctgataagatttcagca
ggtgtaatgtttttagatgatgataagagtaatagggataataataaaagtttgattttt
gaacgactttcaaaaaaatatgattgtgtttatatcgatgaagtgcaagatttggtaggc
tatgatttagatataatagcgcgcatgataaaatatgacatagaagttataatggctggt
gatcctcgccaatgtacatataaaacacattatgctacaaaaaataaaagatattcaaat
ggcaaaatagaagctttttttaaaaatgaatgcaaaaatttaaatatcacaattgatgat
aaaagtttaaataaaacatacaggaactgtaaacccatatgtgattttgcaaatgaaatt
tacaaagatatatcactgatgagctcagaaaaagaaaaggaggcagaccattgcggagtt
tttataataagggaagaatatgttgaacaatatttagagaaattccgtccggtacaacta
agatgtaacatactagttaaaataaatagtgagtatgatgtccttaattttggagagtct
aaaggtttggagtttgacagggtgcttatataccctacagaaaatatatggaggtggatt
tttgattcatccatagcgctgaagcccggtactagagctgatttttatgttgctataaca
agagcgagatatagtgtggcaattgtagaaaaaaaaataaaaaaacagtgtccaatgact
aataaatatataacttattgggaacctgacgggattattcctcatgtaaataaaatagtt
gaaatgaaaacaataacgagtaaaaaattgataaaatcgtag
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