Treponema primitia: TREPR_0175
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Entry
TREPR_0175 CDS
T01507
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpi
Treponema primitia
Pathway
tpi00061
Fatty acid biosynthesis
tpi00071
Fatty acid degradation
tpi01100
Metabolic pathways
tpi01212
Fatty acid metabolism
tpi02024
Quorum sensing
tpi04146
Peroxisome
Module
tpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TREPR_0175
00071 Fatty acid degradation
TREPR_0175
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TREPR_0175
09145 Cellular community - prokaryotes
02024 Quorum sensing
TREPR_0175
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpi01004
]
TREPR_0175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpi04147
]
TREPR_0175
Enzymes [BR:
tpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TREPR_0175
Lipid biosynthesis proteins [BR:
tpi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TREPR_0175
Exosome [BR:
tpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
TREPR_0175
Exosomal proteins of breast cancer cells
TREPR_0175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEF86159
UniProt:
F5YME8
LinkDB
All DBs
Position
102564..104477
Genome browser
AA seq
637 aa
AA seq
DB search
MEQTLPLMLRERVRAIPAVGAQYAKDASGHFQPKTYQQFYDEIRHVAAGLLELGAKRGDH
IGIISDNRQEWLVSDFAVLSIGAADVPRGCDSLEQEIAYILGFTDCTISFVENQKQITKI
LARREELPLLKTLISYDTVDEKTLEAVKAGGLSVCLYEELLKMGEKRHSQNPEEIDAEMN
KGQGEDLATIIFTSGTTGIPKGVMLTHRNFLVQQPSFRLVFETKTGDIWLSVLPVWHVFE
RSIEYVIFYLGNGIAYSKPISSVLLPDFQNIRPQWMVSVPRVWESIMDWTNRNVKQQGWF
WKNWFNFFVNLGIMYNYFRDLTFGLLPNFHGRIRVLDAIIGFFPWVLLCPARGLAWLLVF
RRVKKRLGGRFRAGISGGGSLPVKVDLFFNAVGLRLQEGYGLTETSPIVAVRRYKAARRN
TVGQVLLDTECRIVDNKGAILQPGNNGHLQVRGGQVMKGYYRKPEETAKVLFDDGWIETG
DIAMMTYDNEVRITGRAKDTIVLRGGENVEPIPIELKIQESPWVAQCMVVGQDQKYLAAL
IVPVQEAIMGFAEENNIPIVDYDLLLQQPEINELIANDVFQLVSPQAGFKPFERIFKFRL
IPKPFAVGVELTGKMELIRQKISANYSREIANLFKGK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacccttcctcttatgcttcgggaacgcgtccgggctattccagccgttggg
gctcagtatgcgaaggatgcctccgggcattttcagcccaagacctatcagcaattttat
gatgagattcgccatgtggcagccgggcttttggagcttggggctaagcggggggatcat
atcggtattatttcggacaatcgccaggaatggctggtgagcgattttgcggtgctgtct
ataggcgccgcggacgtaccccggggctgcgattccctggaacaggaaattgcctatatt
ctgggatttactgactgtaccatcagttttgtggaaaaccagaagcagataaccaagata
ctcgcccgcagggaggaattgcccctgcttaaaacccttattagctatgacacagttgat
gaaaagaccctggaagcggtaaaggctggggggctctctgtctgcctgtacgaagaatta
ctgaaaatgggggaaaagcgtcattcccaaaaccctgaagagatagatgcggaaatgaat
aagggccaaggggaagatctggcgaccatcatctttacttccggcactaccgggataccc
aagggtgttatgctgacccacaggaattttctggttcagcagccctcgttccgcctggtg
ttcgagacaaagaccggggatatctggctttcggttttgccggtatggcatgtttttgag
cggtctatagagtacgttattttttacctgggcaacggcattgcctattctaagcccata
tcttcggtgctgctaccggatttccagaacatacgcccacagtggatggtcagcgttccc
cgggtctgggaatccatcatggactggaccaaccggaatgtaaaacagcagggctggttt
tggaaaaactggtttaatttttttgtcaatttagggatcatgtacaattactttcgggac
ctgacttttggcctactccccaattttcacgggcggatccgtgtcctggacgcaattatc
ggctttttcccctgggtcttgctctgtccggcccggggccttgcctggctgttggtgttc
cggcgggtaaagaagcggcttggcgggcggttcagggcgggcatttccggcgggggcagc
ctacccgtgaaggtggacctcttttttaacgctgtgggcctgcggcttcaggaaggctac
ggccttacggagacatcgcccattgtggcggttcgccggtacaaggctgcccggcggaat
accgtgggacaggtcctcttggacaccgaatgcaggatcgtggacaataagggtgctatc
ctgcagccggggaacaacgggcatctccaggtacgggggggccaggtcatgaagggctat
taccggaagcccgaggaaaccgccaaggtgctgttcgacgatggctggattgaaaccggg
gatattgccatgatgacctacgacaatgaggtgcggatcaccggccgggccaaggacacc
atagtactccggggcggtgaaaacgtggagcctattcccatagagcttaagatccaggaa
agcccctgggttgcccagtgcatggtggtcggtcaggaccaaaagtacctggcagccctg
atcgtcccggtccaggaagcgattatgggctttgcggaggaaaacaacatccccattgtg
gactacgatctgctcctgcagcagccggaaataaatgaactgatagccaatgatgttttc
caactggtgagcccccaggcagggtttaagccctttgagcggatctttaagttcaggctt
attcctaagccctttgcagtgggagttgagctgaccggcaagatggagctgatacgccaa
aagatttccgcaaactacagcagggaaattgcgaacctgtttaagggcaaatga
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