Treponema primitia: TREPR_0242
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Entry
TREPR_0242 CDS
T01507
Name
(GenBank) putative RNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tpi
Treponema primitia
Pathway
tpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREPR_0242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpi03019
]
TREPR_0242
Enzymes [BR:
tpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TREPR_0242
Messenger RNA biogenesis [BR:
tpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TREPR_0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Motif
Other DBs
NCBI-ProteinID:
AEF83626
UniProt:
F5YLK4
LinkDB
All DBs
Position
complement(34257..35549)
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AA seq
430 aa
AA seq
DB search
MDHSAIFGPLVSAGHSVSLCGFSALDCYMGFTPLPFTRVDTNADIPALARLLEGLRFPGT
DIADGAVDAGEHSYYFRCIDPEDFFHNSNPSSPSYTLLSFYQNWNTKRFRDPLDMYPLIR
ALRFTGDPRKIPGSKKDPLRLDPGNQKEFALPTSEYLSWQSGLNPRADHFQALMDAALIL
ARYDEPGDSIIGRNTQPLKEILRSLDTLSPGLPPKSEAQRLLLMGILVSPNPGRGLELLK
AAGFIREFWPELDLLDDVDHSKEFHPEGNVWKHTLETLRYRKTTTHNRAAYDFRLSLGLL
LHDVGKPLSASSGSRRFNGHAELGAQAARKFLERMEFKSSLIEDIYYLVKNHMLPAALPR
LPLIRTQEILESPLFPTLLELYRCDESSSFKGLDGYYESSAAYQSYLRNRRNPYRSADGK
KLGKQGTRKY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaccattcagcgatcttcgggccccttgtttccgccggtcattcggtgagcctctgc
gggttcagcgccctggattgctacatggggtttacccccctgccctttacccgggtagat
accaatgccgacattcccgccctggcccggctcctggagggtctccgctttccaggcacg
gatattgccgatggggcagtagatgctggtgagcatagttactattttcgctgtattgat
cccgaggactttttccataattcaaatccaagttccccttcctataccctgttgtctttc
taccagaactggaacaccaaacgtttccgggacccccttgatatgtaccccctgatccgg
gcgcttcgttttaccggagacccccggaaaattcctggcagcaaaaaagatcccctacgc
ctcgatcccggtaatcagaaagaattcgccctaccgaccagtgagtacctatcctggcaa
tccggcctcaaccccagggcggaccatttccaggcgctcatggatgcagcccttatcctg
gcccgctacgatgaacccggcgattccatcatcgggcgcaacacccagccgcttaaagaa
atcctgcggtccctggataccctttctccgggactccccccaaaatccgaagcccagcgg
ctcctcctgatgggcatcctggtatcccccaaccccggcagagggctggaactcctaaaa
gccgccgggttcatccgcgaattctggccggaactagatctactggacgatgtggatcac
tctaaggaattccaccccgagggcaacgtttggaaacacaccctggaaaccttacgatac
cggaaaaccacaacacataaccgggccgcctacgattttcggctttccctggggctcctg
ctccacgatgtgggtaaacccctgtcggcatcttccggaagccgccgtttcaacggccat
gccgaactaggcgcccaagcagcacgaaaatttctggaacgcatggaattcaaatcttcc
cttattgaagatatttattatctggtaaagaaccatatgctccctgcggctcttccacgg
cttcccttgatccgtacccaggaaatcctggaatcccccctgtttcccaccctgctggaa
ctctaccgttgtgacgagtcatcatccttcaaaggattggacgggtactatgaaagcagc
gctgcctatcagagctacctgcgtaaccgccgcaacccctaccggtctgcggatggaaaa
aaactcgggaaacaaggtacccggaaatactag
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