Treponema primitia: TREPR_0648
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Entry
TREPR_0648 CDS
T01507
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
tpi
Treponema primitia
Pathway
tpi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TREPR_0648 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpi03400
]
TREPR_0648 (uvrB)
DNA repair and recombination proteins [BR:
tpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TREPR_0648 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TREPR_0648 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
LTXXQ
Kinesin
Microtub_bd
NPHP3_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEF84617
UniProt:
F5YK38
LinkDB
All DBs
Position
complement(3673499..3675490)
Genome browser
AA seq
663 aa
AA seq
DB search
MRSFEVVSPFSPAGDQGEAIAALAKGIKAGDQFQTLQGVTGSGKTFTMAKIIESVQMPTL
IISHNKTLAAQLFREFKGFFPHNAVEYYVSYYDYYQPEAYVASRDLYIEKDASINDEIER
LRLSATRSLMEREDVIIVATVSCIYGLATPEIYRTMTATFSVGETIDVDALIRRFVELQY
ERNDAVLERGRFRRRGDTLEIFPAYLEEAYRVDLDWDQVKRIRRFNPVSGQVFEELDRAL
IYPAKQFVMPAEMIHNALDRIKDELADRYEFLKNTGKIMEAERLKTRVEYDIEMLTEMGY
CPGIENYSAPLAGRKPGDPPDTLIDYFPKQHLTFIDESHVTLPQIGAMYAGDRSRKTSLV
DYGFRLPCALDNRPLRYDEFAGRLYKAVYVSATPGKAELEQSKRVVQQMIRPTGLLDPII
EVRPSDGQMEDIYGEIRSRIAAGERSLILTLTKKMAEDLTDYLTGLGLKVRYIHSEVETI
ERVEILTQLRQGVFDVLVGINLLREGIDLPEVSFIAILDADKIGFLRSLTSLVQIIGRAA
RNAAGKVIMYADRMSDAMTAAIAETERRRQVQIEYNQANGITPTTIKKAIADILTRHAEE
EKDAAATAVEVLKKSYNVLIPNQRKQLIRALEGEMLEHAKNLEYEQAAAIRDEIAKINEV
GKK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcatttgaagtagtgtccccctttagccccgcaggggatcagggggaggcaatt
gcggccctggcaaagggtattaaggcgggggaccagttccagacccttcagggggttacc
ggctcgggaaaaacttttaccatggcgaagatcattgagtcggtgcagatgcccaccctg
atcatcagccacaacaagaccctggcagcccagctgttccgggaattcaagggctttttc
ccccacaatgcggtggagtactacgtttcctactacgactactaccagcccgaagcgtat
gtggccagccgggacctttatatagaaaaagatgcatccatcaatgatgagattgaacgg
ttgcgcctttccgccactcggagcctcatggagcgggaagatgtgatcatcgtggccacg
gtctcctgcatctacggcctggctaccccggaaatttaccggaccatgaccgccactttt
tctgtaggggaaaccatcgacgtggacgccctgattcgccgctttgtggaactccagtac
gagcgtaacgatgctgtcctggagcggggccgtttccgccgccggggggacaccctggaa
attttccccgcctacctggaggaggcctaccgggtggacctagactgggaccaggtcaag
cggatacggcgatttaatcctgtttccgggcaggtctttgaggagctggaccgggccttg
atctacccggccaaacagtttgtcatgcccgctgagatgatccacaatgccctggaccgt
atcaaagacgaactggcggaccggtacgagtttttgaaaaacaccgggaagatcatggag
gcagaacggctcaagacccgggtggaatacgatatcgagatgctcaccgagatgggctat
tgcccggggatcgagaactactccgcccccctggcgggccggaaacccggggatcccccg
gacaccttgatcgactacttccccaagcagcatcttacttttattgacgagagccacgtg
accctcccccagattggggccatgtacgccggtgaccggagccgcaaaaccagcctggtg
gactacggtttccgcctgccctgcgccctggacaaccggcctctgcgctacgacgaattt
gccggccggctgtacaaggccgtctacgtgtccgccaccccgggcaaggccgaactggag
cagtccaagcgggtggtccagcaaatgatacgccccacagggctcctggacccgattatt
gaagtgcgccccagtgatggccagatggaggacatttacggtgagatccgcagccgcatt
gccgccggggagcgttccctgatactcaccctaaccaaaaagatggccgaagacctgacc
gattacctgaccggcctgggtctcaaggtccggtacatccacagcgaagttgaaaccata
gaacgggtagaaatactgacacaactgcgtcagggggttttcgatgttctggtggggatc
aacctcctccgggaaggcatcgaccttccggaagtttcgtttatcgcaatcctggatgcg
gacaagataggcttcctccgctccctgaccagcctggtgcagatcataggccgggcagcc
cggaacgccgcaggaaaggtgatcatgtacgcggaccgtatgagcgatgccatgacggcg
gctattgcggagaccgagcggcggcggcaggtacagatagagtacaaccaggcaaacggc
atcacacctaccacgataaagaaggctatcgcagacatcctgacccgccacgccgaagaa
gaaaaggacgccgccgccactgcggtggaggtcctcaaaaagtcctacaatgtcctcata
cccaatcagcggaagcagctcatccgggccctggaaggagagatgctggaacacgccaaa
aatttagagtacgagcaggctgcggcgatacgggacgagatagcgaagataaacgaggtg
gggaagaagtag
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