Treponema primitia: TREPR_0987
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Entry
TREPR_0987 CDS
T01507
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpi
Treponema primitia
Pathway
tpi00061
Fatty acid biosynthesis
tpi00071
Fatty acid degradation
tpi01100
Metabolic pathways
tpi01212
Fatty acid metabolism
tpi02024
Quorum sensing
tpi04146
Peroxisome
Module
tpi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TREPR_0987
00071 Fatty acid degradation
TREPR_0987
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TREPR_0987
09145 Cellular community - prokaryotes
02024 Quorum sensing
TREPR_0987
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpi01004
]
TREPR_0987
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpi04147
]
TREPR_0987
Enzymes [BR:
tpi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TREPR_0987
Lipid biosynthesis proteins [BR:
tpi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TREPR_0987
Exosome [BR:
tpi04147
]
Exosomal proteins
Exosomal proteins of breast milk
TREPR_0987
Exosomal proteins of breast cancer cells
TREPR_0987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEF86545
UniProt:
F5YHT5
LinkDB
All DBs
Position
complement(3337645..3339387)
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AA seq
580 aa
AA seq
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MMLNPKDYIADWPDMPHPNFSAWLGDLAVRWGDKTAIFYRSGKQKEFTRWSFTRLAEESR
RIGRGLLAAGLSKGDRVALWSENRPEWIAVWLGAAIAGLVIVPIDFLVSEDECSNILKLT
GAKAFFYSGRKREYAADLLSRGIPAAVRVCISQEGDNFFEAFGTDAGEQKLPATEEIAGT
DPVSIVFTSGTTGFAKGVTLSHQAILANANAAIRSLRAYPWDIFINVLPLHHTYPTTCSF
VSPLSVGAATIIVEKLVGKVVIDDIRDAGGTFLIAVPLLYDKVKAGIEHGYKALPGILRA
ILDPLRKIALEKAKKGNYQFGQRVFKFIRKKAGLGSIRIMVAGGGPLNPKTADFFDSLGF
NIVHGYGMSENGPLISVSTPWHKNNVSVGLPVKYTDVKIIDKNEEGIGEIIVKSPSIMLG
YYENPEATAAMFTPDGYLKTGDLGFIDDQGFIYISGRAKNLIVSSGGKNVYPEEIETHFD
GSRAIAEMLVVGRREPDYGGEEIFAVTVPNFETLQQDYPDRELDDAFLRGLIKKEIEDVN
RTLPGYKKISDFTIRRKPFEKNAQQKIRRFMYKSYEEPKK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttaacccaaaggactacattgccgattggccggatatgccccatcccaatttt
agcgcatggcttggggatttggcggtccgctggggagataagaccgcaattttttatcgg
tccgggaaacagaaagaatttacccgctggtcctttacgcggcttgctgaagaaagccgc
cgcataggccgggggctcctggctgcggggctttccaaaggggaccgggttgccctgtgg
tcggaaaaccgccccgagtggatagcggtttggctgggggcggccattgccgggctggtt
atcgttcccatcgacttcctcgtatccgaggatgaatgttccaatatactaaaactaacc
ggggcaaaggcctttttctattccgggcgaaagcgggagtatgcggcggatctcctgtcc
agggggattcctgcagcggtcagggtctgtataagccaggaaggggacaatttttttgaa
gccttcggcactgatgcgggtgaacagaaacttcctgcaacggaagaaatcgccgggacc
gatccggtgtcaatcgtctttacctcgggtactaccggttttgccaaaggggttaccctc
agccaccaggcgatcctcgccaatgccaacgccgctatccgttccctgcgggcctacccc
tgggatatttttatcaatgtgttgcccctgcaccatacctatcccaccacctgttctttt
gtctcccccctttccgtaggggccgctacgattatcgtagaaaagctggtgggcaaggtg
gtgattgacgatatacgggacgccggcggcacttttcttatcgcggtgcccttactttac
gacaaggtcaaggcggggatcgagcatggctacaaggccctgccggggattttgcgggcc
atcctggaccccctgcggaaaattgccctggaaaaagctaaaaaaggaaactatcaattt
ggccagcgggtctttaagtttatccgcaagaaagcgggcctgggctccatacggataatg
gttgccgggggcggccccctgaaccccaaaactgcggacttctttgactccctgggattc
aacatcgttcacggctacggcatgagcgaaaacggccccctgatcagcgtgagtaccccc
tggcacaagaacaatgtttctgtgggactgccggttaagtataccgatgtgaagattatt
gacaaaaatgaagagggtatcggggagatcatcgtaaagtctccttcgatcatgctgggc
tactatgaaaaccccgaagctactgcggcgatgttcacccccgacgggtaccttaaaaca
ggggacctgggtttcatagacgatcagggctttatctacatcagcggcagggcgaagaac
cttatcgtcagttccgggggaaagaatgtctaccccgaggaaatcgaaacccactttgac
ggatcccgggccatcgcagagatgctggtggtgggccgcagggagccggactacggcggg
gaggagatcttcgccgtgacggtacccaactttgaaactctgcagcaggattacccggac
agggaattggacgatgcctttctccggggcctaataaaaaaggaaatcgaagatgtcaac
cgcaccctgccggggtataaaaaaataagcgactttaccatccgccggaagccctttgaa
aagaacgcccagcagaagatacgccgctttatgtataaaagttacgaagaaccgaagaaa
tag
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