Treponema primitia: TREPR_1617
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Entry
TREPR_1617 CDS
T01507
Name
(GenBank) helicase, UvrD/Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpi
Treponema primitia
Pathway
tpi03420
Nucleotide excision repair
tpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TREPR_1617
03430 Mismatch repair
TREPR_1617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpi03400
]
TREPR_1617
Enzymes [BR:
tpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TREPR_1617
DNA repair and recombination proteins [BR:
tpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TREPR_1617
MMR (mismatch excision repair)
Other MMR factors
TREPR_1617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
AAA_12
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AEF86777
UniProt:
F5YNS6
LinkDB
All DBs
Position
2668334..2670382
Genome browser
AA seq
682 aa
AA seq
DB search
MPKLDIEAKLNKEQLRAVKTIDGPVLIIAGAGSGKTRVITYRIAHMLDQGIPQSAILALT
FTNKAAREMEERVKELTGKKLQNLTVSTFHAFGVRILRDEIERLGYRKNFSIYDETDRTQ
AIKESLRECRISTEGTDLYAVGQLFSNIKTGRFKWGDASGGITGNLANDAWEPVYKDYQH
SLKVYNALDFDDLLALPIQLFEQFPEALEKYRSRYRYIMVDEFQDTSFIQYRIMHLLADR
NVCVVGDDDQSIYSWRGASYENILTFEKDFPGVTEIKLEQNYRSTSTILEAANGVISNNT
NRKEKQLWSGNKGGKPVELFYPQNESEEADFIATRIRDLMMRDRLKYDDFGVLLRTNSMT
RSIEEAFLAENIPYRVSGGTSFFQRKEIKDVLSYLRVIANTNDDVNLLRIINTPRRGIGK
TTITMLNDLARKNHSNIWDSMGRIRYTPDVLFQEAAKGKVELDEFMQLIETYKEELLGKR
GISQKVRALVDSIDYWSYLVTEYSKNEKVAKWKFLNIESLIQSMETWEKDPDNFDPSLYA
YLNRVSLITRDDGDDEAGKGKVNLMTIHASKGLEFPVVFIAGAEDGIIPHERAMEDGEGN
SEFSPLEEERRLFYVAITRARDKLFITSCLHRRRLQSSTDCVPSPFLAEIPPHLVEYHEP
DKPVETPEEAESYFSLIKSKFI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaactcgacatagaagcgaaattaaacaaagagcagctccgggcggtaaaaacc
attgacgggccggtgctgatcattgccggcgcaggatccgggaagacccgggtcatcacc
taccgcatcgcccacatgctggaccagggcataccccagtcggcgatcctggccctgacc
tttaccaataaagctgcccgggaaatggaagagcgggtaaaggaactgacgggcaaaaaa
ctccagaaccttacggtaagcacctttcatgcctttggggtaaggatactgcgggacgaa
attgaacgcctggggtaccggaagaatttttctatctacgatgaaacagaccggacccag
gccatcaaggaaagcctcagggaatgcaggatttctaccgagggcactgatctctacgca
gtggggcagcttttttccaacatcaagacaggccgcttcaagtggggagacgcctcaggc
ggcattaccggaaacctggccaacgatgcctgggagccagtgtacaaggactaccagcac
agcctcaaggtctacaatgccctggactttgacgatctcctggccctgccgattcaactc
tttgaacagtttcccgaagcattggaaaagtaccgcagccgttaccggtatatcatggtg
gacgaattccaggacaccagttttatccagtaccgtatcatgcatctccttgcggatcgc
aacgtttgtgtggtcggggacgatgatcagtccatctattcctggcgtggagccagctat
gaaaacatcctcacctttgaaaaggacttccccggagtaaccgagatcaagttggaacaa
aactaccgttccaccagcaccatcctagaagccgccaacggggtcatctccaacaatact
aaccgcaaggaaaagcagctctggtccgggaacaaggggggcaagccggtggagcttttc
tacccccaaaatgaaagcgaggaggcggactttatcgccacccggatacgggacctcatg
atgcgggaccgtctcaagtacgatgactttggtgttctcctgcggaccaattccatgacc
cgcagcattgaggaagcctttctggcggaaaatatcccctaccgggtttccgggggaacc
agtttcttccagcgtaaggaaattaaggacgtgctctcctacctccgggtcatcgccaac
accaacgatgatgtgaacctcctgcgcatcatcaatacaccccggcggggcataggcaaa
acgaccataaccatgttaaacgatctggcccggaaaaatcactccaacatctgggactcc
atggggaggatccgctataccccggatgtcctcttccaggaagccgccaaaggaaaagtt
gagcttgacgaatttatgcagctcatcgaaacctataaggaagaattgctgggaaaacgg
gggatctcacaaaaagtgcgggccctggttgacagcattgattactggtcgtacctggtg
accgagtacagtaaaaatgaaaaggtcgccaagtggaaattcctcaacatagaaagccta
atccagtccatggaaacctgggaaaaggaccctgacaactttgaccccagcctctacgcc
taccttaaccgggtaagccttattacccgggacgacggggacgatgaggcgggcaaggga
aaggtgaacctcatgaccatccacgcttccaagggcctggaattcccggtggtctttatc
gcaggcgccgaagacgggatcatcccccatgaacgcgccatggaagacggggaaggcaat
tccgaattcagccccctggaagaggaacgccgcctgttctacgtggccatcacccgggcc
cgggacaaactcttcatcaccagctgcctgcaccgccgccgcctgcaaagcagcacagat
tgtgtcccctcgccttttctggcggaaatcccaccccacctggtagaataccacgagccg
gacaaacctgtagaaaccccggaagaagccgaatcctacttctccctcattaaaagcaaa
tttatctaa
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