Treponema primitia: TREPR_1735
Help
Entry
TREPR_1735 CDS
T01507
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tpi
Treponema primitia
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpi03009
]
TREPR_1735
Enzymes [BR:
tpi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TREPR_1735
Ribosome biogenesis [BR:
tpi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TREPR_1735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AEF85954
UniProt:
F5YMT5
LinkDB
All DBs
Position
2528199..2529446
Genome browser
AA seq
415 aa
AA seq
DB search
MGEIFTSLVEHISSGGAGVLNFQGKRVFMDFTAPGDLAVGRIIEDKRSWARAELLELSEA
SPLRASPACPLYGTCGGCSLQHLNYKTQVAEKALILQDAFKHIGGITLPPAFDFIPSPPW
NYRNRMQLHCILQNRPQAKNHRAGTHSGLLATQFPAPLATQFPAQNRLGFMGRKSGDIIP
VDRCPVADPGIASALQEGAILPPPAKDRFTVFSFETTLLSEGTIRGKAQSRGTVTLLGKE
LRMDAGVFFQSNCGMLERLIGDLAQIAGTTDRTLPMADLYCGVGTFAAFLGEQFPRIDLV
EENPEAIVLARENIRGQDGRLFAQTGDLWAKGCTMDSSYGFMVADPPRQGLSPALRRALA
EKGPPVLAYVSCDPGTLARDCGELLAGGYRLEMLRGYDFYPQTAHIESLAVFRKG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatctttacttctctggtcgaacatataagctcaggcggagcgggtgtcctg
aatttccagggaaaacgggtttttatggattttaccgcccccggggacctggctgtaggg
cggattatagaagacaagcgcagttgggcccgggcggaactcctggaactgtccgaggct
tcaccgctcagggccagcccggcctgccccctctacggaacctgcgggggctgctccctc
cagcacctgaactataagacccaggtcgcggaaaaggcgctcatacttcaggacgccttc
aagcacatcgggggtattaccctaccacctgctttcgactttatcccctccccgccctgg
aactaccggaaccggatgcaattgcattgtattctccaaaatcgccctcaggcaaaaaat
caccgggccgggacacattccggactacttgcaacgcagttccccgcgcctcttgcaacg
cagttccccgcgcaaaaccggttgggctttatgggccggaaaagcggcgatatcatcccg
gttgaccgctgcccggtggccgatccggggatagcttcggccttgcaggaaggcgccatc
cttccgcccccggcaaaggaccggtttaccgtcttttcatttgaaaccacccttttgagc
gaaggaactatccggggaaaggcccaaagccggggcacggtaaccctgctgggaaaggaa
ctgcgcatggacgccggggtgtttttccagagcaactgcggcatgttggaacggctcatt
ggggatctggcccaaatcgccggtacaacagaccggacccttcccatggcggacctgtac
tgcggggtgggtaccttcgcagccttcctgggggaacaattcccccgtatcgatctggtg
gaggaaaaccccgaggccatagtcctggcccgggaaaatattcgcggccaggatgggcgg
ctattcgcccaaactggtgatctctgggcaaagggctgtaccatggacagcagctacggc
ttcatggtggcggacccgccccggcagggcctgtccccggcactgcgccgggccctggcc
gaaaaaggcccaccggtactggcctacgtttcctgcgatcccggaaccctggcccgggac
tgcggggaattattagccggggggtaccggctggaaatgctgcggggctacgatttctac
ccccagactgcgcacattgaaagcctggcggtgtttaggaagggatga
DBGET
integrated database retrieval system
