Treponema primitia: TREPR_1737
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Entry
TREPR_1737 CDS
T01507
Name
(GenBank) polyA polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tpi
Treponema primitia
Pathway
tpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREPR_1737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpi03019
]
TREPR_1737
Enzymes [BR:
tpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TREPR_1737
Messenger RNA biogenesis [BR:
tpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TREPR_1737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AEF84014
UniProt:
F5YMT3
LinkDB
All DBs
Position
complement(2525932..2527155)
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AA seq
407 aa
AA seq
DB search
MRIRYGAEQDGKPVKKAIVYTQNEHGINFSDVDSDAVNITSRLRANGFETYIVGGAVRDL
MLGKKPKDFDIVSDATPSRIKKIFRNARVIGRRFRLVHVYFGPKIFEVCTFRSLKDGPTS
NTYGTIEEDVLRRDFSLNALFYDPGKQVVVDYVGGMKDIREKRIRPIIPLSFIFKDDPVR
MIRAVKYAATTGFKLPLTLRWTIKKQAHLLAPISPSRLTEEIFKILHSPSAAVITESLES
FGLYEYLQPNLSRLMKENELFRSRYLKGLSDLNQDGEAKPGEAMAALIRDYLTDFVDWDA
GLTENYKIAFLAARQFVLPMNPPRIELDQAVRLIFNEHGQTIKKKRLFERGKPRMAEREA
VVEADFPGPLVPAAALSPSAEPMRKRRRRHRSRSNTAPKPDSGNSGE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcatccgatatggggcggaacaggacggcaaaccggttaagaaagctattgtttac
acccagaatgaacatggtattaacttttccgatgtggacagcgatgcggtaaatattacc
tcccgtttgcgggctaacggctttgaaacgtatatagtcggcggggcggtccgggacctg
atgctgggcaagaaacccaaggattttgatatcgtcagtgatgccacccccagcaggatc
aaaaagatattccgcaacgcccgggtcataggccgccgtttccggctggtccatgtgtac
tttggccctaaaattttcgaggtctgcaccttccgttccctcaaggacggtcctaccagc
aatacctatggtaccattgaagaggatgtgctgcgccgggatttttctctgaacgccctt
ttttacgatcccgggaaacaggttgtggtggactatgtggggggtatgaaggacatacgg
gaaaaacgtatacgccccattattcccctgtcctttatttttaaggacgatccagtgcgg
atgatccgggcggtaaagtacgccgccactacgggtttcaaactccccctgaccctgcgc
tggacgataaaaaaacaggcccatctcctggcccccatatccccctcgcggcttaccgag
gagattttcaagatactccattcccccagcgctgcggtgattaccgaaagcctggaatcc
ttcggcctctacgagtaccttcagcccaacctttcccggttgatgaaggaaaatgaacta
tttcgctcccggtatctgaagggcctttctgatctgaaccaggatggtgaggccaaaccc
ggggaagccatggctgccctgattcgggattacctgaccgactttgtggactgggatgcg
gggctcacggaaaactacaagatcgcctttttggccgcccggcagtttgtgctccccatg
aaccccccccggattgaactggaccaggcagtcaggctcatcttcaatgagcacggtcag
accatcaagaaaaaacgcctctttgaacggggtaagccccggatggctgagcgggaagcc
gttgtcgaagcggattttcccggccccctcgtcccagcggcggccctttccccgtctgcc
gaaccgatgaggaaacgccgccgcagacaccggtcccgcagtaatactgcgcccaagccg
gattcggggaacagcggggaataa
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