Treponema primitia: TREPR_1758
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Entry
TREPR_1758 CDS
T01507
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpi
Treponema primitia
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpi03016
]
TREPR_1758
Enzymes [BR:
tpi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TREPR_1758
Transfer RNA biogenesis [BR:
tpi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TREPR_1758
Prokaryotic type
TREPR_1758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
TruB_C
Zn_ribbon_10
DUF6061
Motif
Other DBs
NCBI-ProteinID:
AEF84500
UniProt:
F5YM29
LinkDB
All DBs
Position
complement(2502116..2503087)
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AA seq
323 aa
AA seq
DB search
MKHRMTDSNTNGLLLLCKKPGLTSFDSLRIIKKALGTGKVGHTGTLDKFASGLLVVLSGR
ALKLTPWFDRCDKRYEAFIKFGLETDTLDPEGAVVAEGPVPSQAELEAVLDQFRGDILQA
PPAYSAIHIEGKRAHELARSGAVPEMKQRPVTIHALELRSYEPPLAHIYVHCSKGTYIRS
LARDLALAAGSRAHLVSLERTAVGGFALADAVSPDSPDLAGALHPVSPETFQALGIPCIT
VDEAVARNMAHGKPLDALLGGNPVSGPETAVAVFCTSCNEVSRATPTLVREFPASGSGAF
VALIEKKPGVENRWSYGYVNAGA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaccgaatgacggacagtaatactaacgggttactattgttgtgcaaaaagcct
ggcctgacctcttttgactccctcagaattataaaaaaagccctcggcacaggaaaagtg
ggccataccgggaccctggacaaatttgcctccgggctcctggtggtcctctcgggtcgg
gccctgaagctcaccccctggtttgaccgttgtgataaacgctatgaggcgttcatcaag
ttcggccttgaaaccgataccctggaccccgaaggcgccgttgtggctgagggcccggtc
ccttcgcaggctgagcttgaagcggtcctggaccagttccggggggacatactccaggcg
cccccggcctattcggctattcatatagaagggaaacgtgcccacgaactggcccgatcc
ggtgcggtcccggaaatgaaacagcgccctgtgactatccacgctctggaactccgctcc
tacgagcctcccctggcccatatctatgtccactgttccaaggggacctatatccgttcc
ctggcccgggacctggccctggccgcaggttcccgggcccacctggtttccctggagcgg
accgccgtggggggctttgccctggccgacgcagtttccccggattccccggatctggcc
ggtgccctgcatccagtcagtcctgaaacttttcaggccctgggtatcccctgtatcacc
gtggacgaagccgttgcccggaacatggcccatgggaaacccctggacgcgctcctgggg
ggaaacccggtttccggcccggaaactgcggtggctgttttttgcacttcttgcaacgaa
gtttcccgtgcaacaccgactttagtcagagagttccctgcaagtggcagcggcgctttt
gttgcgcttattgaaaaaaagcccggcgtcgaaaaccgctggtcctatggatacgtcaat
gcaggtgcttga
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