Treponema primitia: TREPR_1761
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Entry
TREPR_1761 CDS
T01507
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tpi
Treponema primitia
Pathway
tpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TREPR_1761 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpi03019
]
TREPR_1761 (pnp)
03016 Transfer RNA biogenesis [BR:
tpi03016
]
TREPR_1761 (pnp)
Enzymes [BR:
tpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TREPR_1761 (pnp)
Messenger RNA biogenesis [BR:
tpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TREPR_1761 (pnp)
Transfer RNA biogenesis [BR:
tpi03016
]
Prokaryotic type
tRNA degradation factors
TREPR_1761 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AEF83592
UniProt:
F5YM26
LinkDB
All DBs
Position
complement(2498709..2500898)
Genome browser
AA seq
729 aa
AA seq
DB search
MIQRVSYQIAGKELILETGKIAKQAGGAVFAQYAGSVVIATVCSSHDAVEGLDYVPLTVD
YNEKYYAAGKIPGGFIKRESRPKDKEILVSRLIDRPMRPLFDKRFGREIQVVPTTISADM
VNPPDMLAIIASSAAVHISDIPFGGPIAGVRVCSVDGQLIVNPTYEEIEKSKLEIVVAGT
KEGITMVEGGGKEVDEDLIIAALEKAQQAITDLCNLQDKLRELAGKSKLPLTEIAFTLEN
KDAIRSAAYPRLETACFLKSKQDRHDAISAVKADFAAQYKAQLEDENQKKLFDALFEDLQ
YEILRNSILDKGVRVDGRGTEDIRDISCEVNILPRTHGSALFTRGETQALVVTTLGTAFD
EQIFDDIEGDKRSNFLLHYNFPPYSVGETGRMGTGRREIGHGNLARRSLEAMVPPKTEFP
YTIRIVSEIMESNGSSSMASVCGGTLSMLQAGVPMKKPVAGIAMGLITEGKGGPGDRYAV
LSDILGDEDHLGDMDFKVAGTEEGITGFQMDIKIAGVSPEVMRKALDQAKRGRLHILGIM
NQTINKPVAQISEYAPKIVSLRIDVDKIGALIGPGGKNVKALCEQFSVKINTDDDGTVTI
FGKNSKNSEDAKAAVLGIVMDPEPGRVYNGTVKRIMDFGAFVEILPGKEGLVHISKLSRE
RINNVTDVIKEGQEIPVKLLEVDKMGRLNLSYIDAIDPNGTSDDSGDRHSGGDNRGGDSR
RRDERPRRY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaagagtaagctatcaaattgccggcaaggaactgatccttgaaaccggtaaa
atcgcgaaacaggccggcggggccgtgtttgcccagtacgccggttccgtggtaatcgcc
acggtgtgttcatctcatgatgctgtggagggcctggactatgtgcccctcacggtggat
tataacgagaaatactacgccgccgggaaaatccccgggggtttcatcaaacgggaaagc
cgccctaaggacaaggaaattctggtgtcccggctcattgaccggcccatgcggcccctc
tttgacaagcgctttggccgggaaatccaggtggtgcccaccactatttctgcggacatg
gttaaccccccggatatgctggcgattatcgcctcctccgcggcggtgcatatttctgac
atacccttcggtggccccattgcgggggtgcgggtctgttccgtggatggccagctcatc
gtcaaccccacctacgaagaaatcgaaaagtcaaagcttgagatcgtggtagccggcacc
aaagaaggcatcaccatggttgaagggggcggcaaggaagtggacgaggacctgataatc
gccgccctggaaaaggcccagcaggcgataacggatctctgtaatttgcaggacaaactc
cgggaactggcggggaagtcaaaacttcccctcacggagattgcctttaccctggaaaat
aaagacgccatccgttccgccgcctatccccggctggaaaccgcctgcttcctcaagagc
aagcaggaccgccatgacgccatctctgcggttaaggcagattttgccgcccagtacaag
gcccagcttgaggacgaaaaccagaagaaactctttgatgctctttttgaagatttgcaa
tacgagatactcaggaattctatccttgacaagggagtccgggtggacggccggggtacc
gaggatattcgggacattagctgcgaggtaaacatactgccccgcacccacggttccgcc
ctctttacccggggagagacccaggccctggtggtcaccacattgggcaccgcttttgac
gagcagatcttcgacgatatcgaaggggacaagcgctcaaatttccttctccattacaac
ttccctccctattcagtaggtgaaaccggccgtatgggcacaggccgccgggaaatcggt
catggcaacctggcccgccgttccctggaagccatggttcctccaaagacagaattcccc
tacaccatccggatagtttcggaaataatggagtccaacggctcctcctccatggcttcg
gtctgcgggggcaccctttccatgctccaggccggggttcccatgaagaaacctgtagcg
ggcatcgccatggggcttatcaccgaaggcaagggcggccccggggaccgttatgcggtg
ctttctgacatcctaggggatgaggatcacctgggggacatggactttaaagtagccggc
accgaagaagggatcaccggtttccagatggacatcaaaatcgccggggtcagccccgag
gtgatgcggaaagccctggatcaggccaagcggggacgcttgcacatcctgggcatcatg
aaccagaccatcaacaagccggtggcccagatcagcgagtacgcccctaagatcgtgtcc
cttcgtatcgacgtggacaagatcggcgccctcataggtcccggcggcaaaaacgtcaag
gccctctgcgaacagttcagcgtgaagatcaacaccgatgatgacggcacggtcaccatc
ttcggcaagaatagcaagaactccgaggatgccaaagcagcggtactgggcatcgtgatg
gaccccgaaccgggcagggtttacaacggcacggtcaagcggatcatggacttcggcgcc
ttcgtagaaatactcccgggcaaggaagggctggtccacatttccaagctttcccgtgag
agaatcaataatgttacggatgttataaaggaaggccaggaaattccggtgaaactgctt
gaagtcgacaagatggggcggctcaacctttcctatatcgacgccattgatcccaacggc
accagtgatgacagcggggacaggcacagcggaggcgataaccgtggaggggacagccgc
cgccgggatgaacggccccgccgttactag
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