Treponema primitia: TREPR_1940
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Entry
TREPR_1940 CDS
T01507
Name
(GenBank) tRNA pseudouridine synthase A (tRNA-uridine isomeraseI) (tRNA pseudouridylate synthase I) (PSU-I)
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tpi
Treponema primitia
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpi03016
]
TREPR_1940
Enzymes [BR:
tpi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TREPR_1940
Transfer RNA biogenesis [BR:
tpi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TREPR_1940
Prokaryotic type
TREPR_1940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEF85363
UniProt:
F5YKJ4
LinkDB
All DBs
Position
complement(2318279..2319121)
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AA seq
280 aa
AA seq
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MNDATRNIRLLVAYDGTDFSGWQRQGEKGPQPFSPCLKQFCPGQNCTDEVDAGRLRVRTV
QGVIEAALEKIHKHPVALTGSGRTDAGVHAAGQVANFSTDIERIDAARFIPALNGFLPRD
VRILEALETLPDFHARFDARSRMYRYHFICGRPALPHELRYNLQLWRRPDISLLNAYARL
LQGEINCSVFAWPKDPSESRNRYFFHAGFFMQGDTLIFEVQANAFLWKMVRSIVGTLLYY
EEKRLPPEELQKIIVSGDRSLAGPTVPPNGLFLWKVEYYR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgctacccgcaacatacggctgcttgtagcctatgatggtacggatttttca
gggtggcagaggcaaggagaaaaaggcccccagcctttttctccttgccttaagcagttt
tgccctgggcaaaactgcacagatgaagtggacgcggggcgccttcgggttcgcactgtc
cagggagttatagaggcagccttggaaaaaatccacaagcatccggttgccctgaccggt
tccggcaggaccgatgcaggggtacacgccgcaggccaggttgcgaatttttctaccgat
atagagcgcatagatgctgcgcgttttatccccgccctgaatggcttcctccccagggat
gtacgcatcctggaagccctggaaaccctgccggattttcacgcccgctttgacgcccgt
tcccgtatgtaccggtatcactttatctgcggtcgtcccgccctgccccatgaactgcgc
tacaacctccagctctggcggcgtccggatataagccttctgaacgcctatgcccggctt
ttgcagggcgagataaactgttcggtctttgcctggccaaaggaccccagtgaatcccgg
aaccgctatttttttcacgccgggttttttatgcaaggggataccctaatcttcgaggtt
caggccaacgcctttttatggaagatggtccgttctattgtgggaacattactgtactat
gaagaaaagagattgcccccggaggagttgcagaagatcatcgtatcaggggatagaagc
cttgcgggccccacggttcccccaaacgggctgtttctgtggaaggtggagtattaccgg
tag
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