Treponema primitia: TREPR_2469
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Entry
TREPR_2469 CDS
T01507
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tpi
Treponema primitia
Pathway
tpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TREPR_2469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpi03021
]
TREPR_2469
Transcription machinery [BR:
tpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TREPR_2469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AEF84949
UniProt:
F5YH35
LinkDB
All DBs
Position
1731553..1732626
Genome browser
AA seq
357 aa
AA seq
DB search
MTKTIVKTATLERLGKDAGVAVKNPGEGGPEKIRSKKRMPNPGLQKPKKSKTVKETDPLA
LYFKQISKFPLLTVQEEQAIGEKIVNIRTQIRTLEDSYLDEEKDPPYKQERSRLDESLLL
YKNRMINSNLRLVVSIAKNYQHRGLSLLDLIDEGNIGLIEAVERFDYTRGCRFSTYGTWW
IRQAIIKSIADKGRVIRIPIHMLNTIKKCYFVAKQLTQDLGRDPSEEELSEYLGVPVGKV
KEIVKLSQETTSLDTIVDDGNLTRLADLIKDDTMEEPFEIVFSMTLQETMGDILTHLSER
EMKIIQLRFGLAGEGPLTLEETGKLLGITRERVRQIQEKATFKLRNLKQLHELRGNP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaatagttaaaacagcgacattggaacggcttgggaaagatgcaggggtt
gcagttaaaaaccctggtgagggaggaccggaaaaaatccggagcaaaaaaaggatgcca
aatcccggtttgcaaaagcccaaaaagtctaaaaccgtaaaagaaacggatcctctggcc
ttatattttaagcagatttcaaaatttcccctcctgacggtccaggaagaacaggcgata
ggtgaaaaaattgtcaacatccgaacacaaatacgtaccctggaagattcttatttggat
gaggaaaaggatccgccttataagcaggaacggtcccggctggacgagagtctcttgctt
tacaaaaaccggatgatcaactctaacctgcgtctagtggtttctattgccaaaaattac
cagcaccggggtttatccctgctggatctgatcgacgaaggcaatatcgggcttattgag
gcagttgagcgctttgattatacccggggctgccgtttctccacctacggcacctggtgg
atcaggcaggctatcattaagagcatcgccgacaagggccgggttatccgtatccccatc
cacatgctgaatactataaaaaaatgttactttgtggctaaacaactgacccaggatctg
ggcagggaccccagcgaagaggaactttcagaatacttaggcgtgcccgtgggcaaggtt
aaagagatagtcaaactctcccaggaaactaccagtctggataccatcgtggacgacggc
aaccttacccggctggcggatcttatcaaggatgacaccatggaggagccttttgagatt
gtcttttccatgaccctccaggaaactatgggggatatactcacccacctttccgaacgg
gagatgaagatcatccagctccgtttcggcctggctggcgaggggcccctgaccctggaa
gaaaccgggaagctcctggggataacccgggaacgggtgcggcagatccaggaaaaagct
acctttaagctgcggaaccttaaacagctccacgagttacggggaaacccctag
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