Treponema primitia: TREPR_2604
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Entry
TREPR_2604 CDS
T01507
Name
(GenBank) DNA polymerase domain protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpi
Treponema primitia
Pathway
tpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TREPR_2604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpi03400
]
TREPR_2604
Enzymes [BR:
tpi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TREPR_2604
DNA repair and recombination proteins [BR:
tpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TREPR_2604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEF84206
UniProt:
F5YGI3
LinkDB
All DBs
Position
complement(1580126..1580998)
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AA seq
290 aa
AA seq
DB search
MAALVLNPPLELSRLLGFNRDMTAEEKLSLALFLDTAGDFFRDGYHKPREPSAFTDDPEK
ASAAEKVTDTVTRPSPEALGVEKVTVTVSDTLEAVAADIVRCVACPLHGGRSQAVPGEGV
ERPLVMVIGEGPGADEDASGRPFVGKAGQLLDKMLGSVGLSREKNCFIANVVKCRPPDNR
DPLVEETESCAPFLARQIRLLEPRIILCAGRVAAQTLLKTGSPIGSLRGQFTPYHVHETL
SIPVLATYHPSALLRDDTYKRPAWEDLKLLRQRLIEIDESYAREAGEGGV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcgcttgttcttaatccgccccttgaactctcccggctcttagggttcaatagg
gacatgaccgccgaagaaaaattgagccttgccctgttccttgacactgcgggggatttt
ttccgggatggctaccataagccccgggaacccagtgccttcaccgatgacccggaaaag
gcatcagccgccgaaaaggtgactgacaccgttacgaggccctcaccggaggcgctgggc
gtcgaaaaggtgactgtcaccgtttcagacaccctggaagcggtggcggcggatattgtc
cgctgtgttgcttgccccttgcacggcgggcggagccaggcggtccccggcgagggggtg
gagcggcccttggtcatggttattggggaaggccccggggcggatgaagatgcctcgggg
cggccttttgtgggtaaggcgggacagctcctggacaagatgcttggttcggtggggctt
tcccgggagaaaaactgctttatcgccaatgtggtaaaatgccggcctccggataaccgg
gaccccctggttgaggaaaccgaatcatgcgcccccttccttgcccggcagatacgcctc
ctggaaccccggattattctctgtgcgggacgagtcgccgcccagaccctgcttaaaacc
gggtctcccatcggaagcctccgggggcagttcaccccttaccatgtacatgaaaccctg
agtatccccgttttagccacctaccatcccagtgccctgctccgggatgatacctacaaa
cgccccgcctgggaggacctgaaactgctcaggcagcgtctcatagaaattgatgaaagc
tacgcccgggaggccggggaaggcggcgtttag
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