Treponema primitia: TREPR_2731
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Entry
TREPR_2731 CDS
T01507
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
tpi
Treponema primitia
Pathway
tpi02020
Two-component system
tpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TREPR_2731 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TREPR_2731 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpi03021
]
TREPR_2731 (rpoN)
Transcription machinery [BR:
tpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TREPR_2731 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
HTH_38
Arg_repressor
HTH_35
HTH_Crp_2
HTH_5
Sigma70_r4_2
TetR_N
HTH_31
HTH_23
HTH_24
HTH_3
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AEF84245
UniProt:
F5YQK4
LinkDB
All DBs
Position
1452788..1454146
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AA seq
452 aa
AA seq
DB search
MQLQRPSFIQEQRLKMNPQQIQSIKMMGLPIMDLREKIEEEVERNPALEVVADHTVLSLD
EAYVPRKEENDYFETSSDSGFVSKGGDEESAERHKFLEGALSRPETLQEHLLWQLRLEIA
EEPVRRIGERLIQNLDENGFHKEPLDALLKENNPAYIVRALAIIRSLDPVGTCTADYRES
LRVQAELLPAPPPGIIEALDYLEQLERGKIAEVARKLARSEAEVLAIFEQIKELSPFPGR
RFASDNTRYVVPDVQVIKKEGEFVIILNDEEIPVLGLNPFFMKISGEKGEDKSARDFVRE
NIKEARWFIQSINERNHTLLRVSRAIVEFQRAFFVNGPRDIAPLTLRDIAQELGLNESTI
SRAARGKYMQTEWGIFEIRHFFTNSISGTGSDRSRYSKEGVKEIIRELISTEGKHSSDQE
IAELLARQGIPLARRTVAKYRNELDLGSSYTR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctgcagcgtccgtcctttatccaggaacagcgtctcaaaatgaatccccagcag
attcagtctatcaaaatgatggggctgcccattatggatctgcgggagaaaatcgaggaa
gaggttgagcggaaccctgccctggaagtggtggcggatcatacggtcctttccctggat
gaagcctatgttccccgcaaagaagagaatgactactttgaaaccagttcggattcgggc
tttgtcagcaaggggggggatgaggaatctgcggagcggcataaattcctggaaggggcc
ctgtcccggccggaaaccctccaggagcacctgctctggcagcttaggcttgaaattgca
gaggaaccggtacgccgtattggggaacgtttaattcaaaacctggacgaaaacggcttc
cacaaggaacccctggatgccctgcttaaggaaaataatcctgcctatattgtccgggcc
ctggccataatccgctccctggaccccgtggggacctgtaccgccgattaccgggaatcc
ctcagggtgcaggcggaactccttccggcgccccccccgggcatcatcgaggccctggat
tacctggaacagctcgagcggggcaaaattgccgaagtagcccgaaagctggcccgttcc
gaagctgaagtcctggccatatttgagcaaatcaaggaactgtcccccttcccgggtcgg
cgttttgcatcggacaatacccgctatgtggttccggatgtgcaggttatcaaaaaagag
ggggaatttgtcatcatcctcaatgacgaggagatccccgtattgggcttaaatcctttt
tttatgaaaatttccggtgaaaagggagaggataagtccgcccgggattttgtccgggaa
aatattaaggaagcccggtggtttatccagtcgattaacgagcggaaccacaccctgctc
agggtatcccgtgctatagtggagtttcaacgggctttttttgtgaacggcccccgggac
attgcacccctgaccctgcgggatatagcccaggaactggggctgaatgagtcaactatt
tcccgagccgcccggggaaagtatatgcaaaccgaatggggtatctttgagattcgccat
ttctttaccaattccatcagtggaaccggatccgacaggtcccggtattcaaaggagggg
gttaaggagataataagggaacttatcagcaccgaggggaagcactcttcggatcaggaa
attgccgaacttctggccaggcagggaatccccctggccaggcggaccgtcgccaagtac
cggaacgaactggatctgggatcatcgtacacccgatag
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