Treponema primitia: TREPR_3200
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Entry
TREPR_3200 CDS
T01507
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tpi
Treponema primitia
Brite
KEGG Orthology (KO) [BR:
tpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpi03400
]
TREPR_3200 (radA)
DNA repair and recombination proteins [BR:
tpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TREPR_3200 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
ChlI
DnaB_C
AAA_16
AAA_22
Lon_C
AAA_24
NTPase_1
DAP3
DUF7129
SLFN-g3_helicase
Zn_ribbon_NOB1
nSTAND3
AAA_30
GvpD_P-loop
AAA
KdpD
Rad51
DUF7125
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEF86237
UniProt:
F5YL12
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All DBs
Position
complement(953243..954646)
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AA seq
467 aa
AA seq
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MVKLGISCYTNPAMKKQKAFIFKCTGCGHEEPKWLGRCPECGEWNTLIETPVSSGQGGSR
SPGRSAPPQSYPLSSVDPQEGTRIGSGIGELDRVLGGGIMKRSAILVGGEPGIGKSTLLL
QAAASAETRGRVLYVSGEESAGQVRMRADRLGLKGDNIEICCTGRLSEIETILEAVKPVI
IMVDSAQTLHSDEAGPAPGTVNQMKYCSWELISWVKEHDAALFLVAHVTKEGLISGPKTL
EHMVDTVLYFEGAASNEGDSRFLRATKNRFGSVDEIGIFVMGERGLSPVADPSLLFLVQR
EGGLPPGTVTAAVLEGSRTLLVEIQALAVPAKGAMSRVFSDRIDSARVSRVAATLEKHLN
LRLSDHDLYVNVAGGIRIAEVGVELALAMALYSARTGLPLPSDAAIAGELSLAGEIRPVR
RLPGRIKTARSLGFEQFLGPIDRQESGETGGLNAVGDLKSAIKALFG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttggttaaactgggaatttcttgctatactaacccagctatgaaaaagcagaaagccttc
atcttcaaatgtaccggctgcggccacgaggaacccaagtggctgggccgctgtcctgaa
tgcggggagtggaatacccttattgaaacacccgtaagctcaggccaggggggaagccgt
tctccgggacgctcggcgccgccccagtcttaccccctgtcgtcggtggatccccaggag
gggacccgtatcggcagtggtatcggagaactggaccgagtcctgggcgggggcattatg
aaacgatccgccatcctggtggggggcgaaccggggattgggaagtctacactgctgctc
caggctgcggcatctgctgaaacccggggccgagtcctctatgtttccggggaagaatcc
gccgggcaggtgcgtatgcgggcggaccgcctgggtttaaaaggggacaatatcgaaatc
tgctgcaccgggaggctttcggaaatcgaaaccatcctggaggcggttaaaccggtgatc
atcatggtggattccgcccagaccctgcacagcgacgaagctggccccgcaccgggcacg
gtaaaccagatgaagtactgttcctgggaactcatctcctgggtcaaagagcatgacgcc
gccctgtttctggtggcccatgtgaccaaggaagggctgatctcagggcccaaaactctg
gaacacatggtagacacggtattgtattttgaaggggccgcctcaaatgaaggggacagc
cgctttctcagggcgaccaagaaccgcttcggctcggtggacgaaatcggcatttttgtc
atgggtgaacgggggctttccccggtggcggacccctccctgctcttcctggtacagcgt
gaggggggactgcccccgggtacggtcaccgctgcggtactggagggttcccggaccctg
ctggtggagattcaggccctggcagtacccgccaagggcgccatgagccgggtgttttcc
gaccgcatcgactctgcccgggtctccagggtggcagccaccctggaaaagcacctgaat
ctgcggctttcggaccacgacctgtacgtcaatgtggccgggggcattcggatcgccgag
gtcggggtagaactggccctggccatggccctctactccgcccgaaccgggcttcccctc
ccctcagacgctgccatagccggggaattgtctctggccggcgagatacgtccggtcagg
cgcctcccggggcggatcaaaacggcccgaagcctgggcttcgaacagttcctgggcccc
atagaccgtcaggaaagcggggaaaccggggggctgaatgcagtgggggatttaaaatct
gcgataaaagctttgtttggatga
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