Thermococcus piezophilus: A7C91_06645
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Entry
A7C91_06645 CDS
T04941
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tpie
Thermococcus piezophilus
Pathway
tpie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7C91_06645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpie03019
]
A7C91_06645
Messenger RNA biogenesis [BR:
tpie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A7C91_06645
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
CM_2
Motif
Other DBs
NCBI-ProteinID:
ANF22885
UniProt:
A0A172WHY6
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All DBs
Position
1202141..1203463
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AA seq
440 aa
AA seq
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MIKIYTLSGYEEVGKNMTAVEYNGEVVIIDMGIRLDRVLIHEDVNIQQFPTKELQKLGAI
PDDSPIRNKKVVAIAFTHGHLDHIGAVGKLAPHYPDVPIYGTPYTIKLAKSEVKSEQYFE
VKNPMYETEYGEIVQVSENLAIEFVQITHSIPQAAIVVVHTPEGAVVHTGDFKFDNNSPL
GERPDYDRLKELGKEGVKVLIPESTRVAEPTKTPSEAVAQMLLEDFFLYEGMESDGLIAT
TFASHIARLQELIWIANRMGRQAVLVGRSLAKYTGIAKQLGLIKMKGAKAVRSPNAVRKV
LKEVSQARENYLLIVTGHQGEPGAVLTRIANGELYDIGKRDTVVFSAGTIPNPLNRAQRY
VLETKLKMKGVRMIKDLHVSGHASREDHRYLLRMLNPENIVPGHGDFRMLTYYAELAEEE
GYLIGRDVFVSRNGYTVDIK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgataaagatctacacgctcagcggttacgaggaagtcggtaaaaacatgaccgccgtc
gaatacaacggagaggtcgttataatcgatatgggaatcaggctagaccgcgtcctcatc
catgaggatgtgaacattcagcagttccccacgaaggagctccagaagcttggggctatt
cctgacgattcaccaatcaggaacaagaaagtcgtcgcgatagcctttacccacggccat
ctcgaccacataggtgccgtcggcaagctcgctccccattatccagacgtgccgatatat
ggaactccctacaccataaagctcgccaagagcgaggtcaagagcgagcagtacttcgaa
gtcaagaacccgatgtacgagacagaatacggcgagatagtccaggtgagcgagaactta
gctattgagttcgttcagattacccactccatccctcaagctgccattgttgtagttcac
acgcctgaaggcgccgttgtccacacaggagattttaagttcgacaacaacagtcctctc
ggcgagaggcccgattacgacaggcttaaagagcttgggaaggaaggtgtcaaggttctt
atccccgaatcgacgcgcgttgctgaacccaccaaaacgccgagcgaagcagttgctcag
atgctcctcgaggacttcttcctctatgaaggcatggaatctgacggactgatagccaca
accttcgccagccatatagcacgccttcaggagctcatctggatagccaacaggatgggc
aggcaagctgtcttagttggccgctccctggccaaatacacgggcatagccaagcagctt
ggtctcatcaaaatgaagggagccaaggccgtgaggagcccaaacgcggtcaggaaggtt
ctaaaagaggtttcccaggcaagggagaactacctgttaatagtcaccggccatcagggt
gaacctggtgccgttttaaccaggatagcaaatggggagctctacgacataggcaagcgc
gataccgttgttttctccgccggcaccattcccaacccccttaacagggcccagcgctac
gttctcgaaaccaagctcaagatgaagggcgttaggatgataaaggatctccacgtttca
ggccacgccagcagggaggaccaccgctacctgctgagaatgctcaacccagagaacata
gtccctggccacggtgactttaggatgctcacctactacgctgagctggccgaggaggag
ggctaccttataggcagggatgtcttcgtctcgcgcaacggctacactgtggatattaag
tag
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