KEGG   Thermococcus piezophilus: A7C91_06645
Entry
A7C91_06645       CDS       T04941                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
tpie  Thermococcus piezophilus
Pathway
tpie03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpie00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A7C91_06645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpie03019]
    A7C91_06645
Messenger RNA biogenesis [BR:tpie03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A7C91_06645
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 CM_2
Other DBs
NCBI-ProteinID: ANF22885
UniProt: A0A172WHY6
LinkDB
Position
1202141..1203463
AA seq 440 aa
MIKIYTLSGYEEVGKNMTAVEYNGEVVIIDMGIRLDRVLIHEDVNIQQFPTKELQKLGAI
PDDSPIRNKKVVAIAFTHGHLDHIGAVGKLAPHYPDVPIYGTPYTIKLAKSEVKSEQYFE
VKNPMYETEYGEIVQVSENLAIEFVQITHSIPQAAIVVVHTPEGAVVHTGDFKFDNNSPL
GERPDYDRLKELGKEGVKVLIPESTRVAEPTKTPSEAVAQMLLEDFFLYEGMESDGLIAT
TFASHIARLQELIWIANRMGRQAVLVGRSLAKYTGIAKQLGLIKMKGAKAVRSPNAVRKV
LKEVSQARENYLLIVTGHQGEPGAVLTRIANGELYDIGKRDTVVFSAGTIPNPLNRAQRY
VLETKLKMKGVRMIKDLHVSGHASREDHRYLLRMLNPENIVPGHGDFRMLTYYAELAEEE
GYLIGRDVFVSRNGYTVDIK
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgataaagatctacacgctcagcggttacgaggaagtcggtaaaaacatgaccgccgtc
gaatacaacggagaggtcgttataatcgatatgggaatcaggctagaccgcgtcctcatc
catgaggatgtgaacattcagcagttccccacgaaggagctccagaagcttggggctatt
cctgacgattcaccaatcaggaacaagaaagtcgtcgcgatagcctttacccacggccat
ctcgaccacataggtgccgtcggcaagctcgctccccattatccagacgtgccgatatat
ggaactccctacaccataaagctcgccaagagcgaggtcaagagcgagcagtacttcgaa
gtcaagaacccgatgtacgagacagaatacggcgagatagtccaggtgagcgagaactta
gctattgagttcgttcagattacccactccatccctcaagctgccattgttgtagttcac
acgcctgaaggcgccgttgtccacacaggagattttaagttcgacaacaacagtcctctc
ggcgagaggcccgattacgacaggcttaaagagcttgggaaggaaggtgtcaaggttctt
atccccgaatcgacgcgcgttgctgaacccaccaaaacgccgagcgaagcagttgctcag
atgctcctcgaggacttcttcctctatgaaggcatggaatctgacggactgatagccaca
accttcgccagccatatagcacgccttcaggagctcatctggatagccaacaggatgggc
aggcaagctgtcttagttggccgctccctggccaaatacacgggcatagccaagcagctt
ggtctcatcaaaatgaagggagccaaggccgtgaggagcccaaacgcggtcaggaaggtt
ctaaaagaggtttcccaggcaagggagaactacctgttaatagtcaccggccatcagggt
gaacctggtgccgttttaaccaggatagcaaatggggagctctacgacataggcaagcgc
gataccgttgttttctccgccggcaccattcccaacccccttaacagggcccagcgctac
gttctcgaaaccaagctcaagatgaagggcgttaggatgataaaggatctccacgtttca
ggccacgccagcagggaggaccaccgctacctgctgagaatgctcaacccagagaacata
gtccctggccacggtgactttaggatgctcacctactacgctgagctggccgaggaggag
ggctaccttataggcagggatgtcttcgtctcgcgcaacggctacactgtggatattaag
tag

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