Candidatus Tremblaya phenacola: TPPAVE_017
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Entry
TPPAVE_017 CDS
T02908
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tpj
Candidatus Tremblaya phenacola
Pathway
tpj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPPAVE_017 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpj01007
]
TPPAVE_017 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpj03016
]
TPPAVE_017 (serS)
Enzymes [BR:
tpj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
TPPAVE_017 (serS)
Amino acid related enzymes [BR:
tpj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TPPAVE_017 (serS)
Transfer RNA biogenesis [BR:
tpj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TPPAVE_017 (serS)
Prokaryotic type
TPPAVE_017 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
TraI_middle
Motif
Other DBs
NCBI-GeneID:
17622812
NCBI-ProteinID:
AGO28221
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All DBs
Position
complement(13537..14661)
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AA seq
374 aa
AA seq
DB search
MLSIIRTATPYYKIRGRVKRNVERRLKRQSSWDGRHLNNLLKAHRCLIKQRGKGGCLKSE
SVKIFNGLLFEILLAPNQLHFSVPYASSIPKDWGKGTIVWHKAKGSHFVFSKRLGFDANA
GLEVAGSKFSILREPMSSWDRILTQLMLEVQTKRHHYEEVGISHLIKEEALYFVGHLPKF
REEMFKVSGAQLNLFLIPTSEVVLVSLVQNKVLESSALPKRLVAFSFCFRFERGRYGKEN
RGLLRQRQFSKVEIVQIAPEASSYRTLDEVLRDAEAVLQKLGISYRLLEVGSADVGSSSA
KTFDVEVWLPSLGLYKEVSSCSNTESFQSQRLQTKYLLGSSQHFAHIINGSGLAVGRALT
AVLEQATNSKWKGD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtattattagaacagcaacaccgtattataaaatcagagggcgagtaaaaagg
aatgttgagaggagattaaaacgtcagagcagttgggatgggaggcaccttaacaactta
ttaaaagctcataggtgcctcataaaacagagaggaaaagggggctgtcttaaaagtgag
agcgtaaaaatatttaatggcctcctgtttgagatattactagcccccaaccaattgcat
tttagtgttccgtatgccagttcaataccaaaagattggggaaagggcaccattgtttgg
cacaaagctaaaggatcccattttgtttttagtaagaggttggggtttgatgccaatgct
ggattagaggttgcaggttctaaatttagcatcctaagagaaccaatgagcagttgggat
agaatactgacccaactgatgttagaggttcaaacaaaaaggcatcattatgaggaggtt
ggcatatcacacctaattaaagaggaggccctgtattttgttgggcaccttccaaagttt
cgagaagagatgttcaaagtgtccggtgcccaactgaacctgtttctaattccaacatca
gaggtcgtgctagttagcctagtacaaaacaaagtgctagaaagcagtgcccttcccaaa
aggctcgttgctttttcattttgttttaggtttgaaaggggcaggtacggcaaagaaaat
agggggctattacggcaacgccagttctcaaaagtggagatcgtccagatcgcaccagaa
gccagctcttacaggacattagatgaggttttaagggatgccgaggcagttctccaaaag
ctcggcatctcttacaggctattagaagtgggatctgctgacgttggatcgtcatcagca
aaaacttttgatgttgaggtttggcttccttctcttgggttgtacaaagaagtttctagc
tgttccaatacagaaagctttcaatcccaaagattacaaactaagtatttattaggctca
tcacagcatttcgcccacatcattaatggttctgggttggcagttggaagagcattaacg
gcagtgctagaacaagccaccaattcaaaatggaagggtgactga
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