Candidatus Tremblaya phenacola: TPPAVE_055
Help
Entry
TPPAVE_055 CDS
T02908
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpj
Candidatus Tremblaya phenacola
Pathway
tpj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPPAVE_055 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpj03019
]
TPPAVE_055 (groL)
03110 Chaperones and folding catalysts [BR:
tpj03110
]
TPPAVE_055 (groL)
03029 Mitochondrial biogenesis [BR:
tpj03029
]
TPPAVE_055 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpj04147
]
TPPAVE_055 (groL)
Enzymes [BR:
tpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TPPAVE_055 (groL)
Messenger RNA biogenesis [BR:
tpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TPPAVE_055 (groL)
Chaperones and folding catalysts [BR:
tpj03110
]
Heat shock proteins
HSP60 / Chaperonin
TPPAVE_055 (groL)
Mitochondrial biogenesis [BR:
tpj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TPPAVE_055 (groL)
Exosome [BR:
tpj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TPPAVE_055 (groL)
Exosomal proteins of other body fluids (saliva and urine)
TPPAVE_055 (groL)
Exosomal proteins of breast cancer cells
TPPAVE_055 (groL)
Exosomal proteins of colorectal cancer cells
TPPAVE_055 (groL)
Exosomal proteins of bladder cancer cells
TPPAVE_055 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
17622850
NCBI-ProteinID:
AGO28250
LinkDB
All DBs
Position
complement(43072..44724)
Genome browser
AA seq
550 aa
AA seq
DB search
MLAKEVLFGDSARIKMIEGVNILANAVKVTLGPKGRNVVLEKSFGGPVITKDGVTVAKEI
ILKDKLQNVGAQMVKEVASRTSDHAGDGTTTATVLAQSIIKEGMRHVASGVNPMDIKRGI
DLAVNAAVRELRKISRPCTSNKEIAQVGSISANNDKPIGERIAEAMSKVGKEGVITVEDG
KSLSDELEIVEGMQFDRGYLSPYFANNQDKLVANLDNPLILLNEKKIQNIRDLLPILEKV
AKTSRPLLILAEDVEGEALATLVVNSMRGILKAVAVKAPGFGDRKKMILEDIAILTGGKV
VSDEAGLTLEKIEIGDLGQAKSVKVRKDSTTIVDGFGDPKIINDRIRQIRTQISRSPSDY
DREKLQERVAKLAGGVAIIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGTALI
RARNSISNLKANNNDQEAGIRIVLRAMEEPLRQIVQNGGEEASIIVSTVSAGKNSNFGYN
AATGKYADLVEVGVVDPTKVTRTALQNAASIAGLMLTTEVSITDAKREGGSGASPSPLSN
SINNTGGLDV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgttagctaaagaggtgctgttcggcgattcggcaagaatcaaaatgattgagggtgtg
aatattctagcaaacgccgtcaaagttacattaggccccaaaggcaggaatgttgttcta
gaaaagagttttggtggaccagtcataacaaaagacggcgttacagtcgcaaaagaaata
atccttaaggacaaacttcagaatgttggagcgcagatggtaaaagaggtggcatcaaga
actagcgatcatgctggggatggcacaacaactgcaactgttttagctcaatctatcatt
aaagaagggatgagacatgttgcttctggggttaacccaatggacattaaaaggggaatt
gatttggcagttaatgcggcagtcagagagctcaggaagatcagcaggccgtgcacctca
aacaaagagattgcgcaggtcggatctatttcagctaacaatgacaaaccaattggagaa
cgtattgctgaggcaatgagtaaggttggaaaggagggtgttattacagttgaagatggc
aaatcactttctgatgaattggaaattgtggaaggcatgcaatttgatagaggctattta
tccccttactttgctaacaaccaagataagctagtggctaacctagacaacccactaatt
ctactgaacgagaagaaaatccaaaacataagggacctgctaccaatccttgagaaagtt
gccaaaactagcaggccccttctcattcttgctgaagacgttgagggagaagctctagca
acgttggttgttaacagcatgagaggcatacttaaagcagtggcagttaaagccccaggg
tttggagacagaaagaagatgatattagaagatattgctatactaactggaggaaaggtg
gtatctgatgaagcaggtctgactttagagaaaattgagattggggatcttggacaagcc
aaaagcgttaaagtcagaaaagacagcacaacaattgtagatggatttggtgatcccaag
attattaatgatagaataaggcagatcagaacccaaattagcaggtccccctcagattat
gacagagaaaaactacaggaacgtgtggcaaaattagctggtggagttgcgataataaaa
gttggggctgctactgaagttgaaatgaaagagaagaaggcgagggttgaagatgccctc
catgctactagagctgcagttgaagaaggcatagttcctggtggtggcacagcccttata
agagcacgcaattcaatttccaatctcaaagctaataataatgaccaagaagctggcatt
aggatcgtactgagagcaatggaggagccattgagacagatcgttcaaaatggtggagag
gaagctagtatcattgtctcaactgtttctgctggaaaaaacagcaacttcgggtacaat
gctgcaactggaaagtacgctgatttagttgaggttggggtcgtcgatccaaccaaagtc
acaagaacggccctacagaatgccgcttcaattgctggtttaatgctaactactgaggtc
tcaataacagacgctaagagagaagggggatcaggcgcctccccttctccattaagtaac
agcataaataatacgggaggattagatgtttag
DBGET
integrated database retrieval system
