Candidatus Tremblaya phenacola: TPPAVE_112
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Entry
TPPAVE_112 CDS
T02908
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
tpj
Candidatus Tremblaya phenacola
Pathway
tpj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPPAVE_112 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpj03032
]
TPPAVE_112 (dnaB)
Enzymes [BR:
tpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TPPAVE_112 (dnaB)
DNA replication proteins [BR:
tpj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TPPAVE_112 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_22
DEAD
AAA_16
KTI12
AAA_19
AAA_11
nSTAND3
NPHP3_N
AAA_33
GvpD_P-loop
ATPase_2
Motif
Other DBs
NCBI-GeneID:
17622909
NCBI-ProteinID:
AGO28298
LinkDB
All DBs
Position
92439..93803
Genome browser
AA seq
454 aa
AA seq
DB search
MRASDEGGKRTPPSFLTGVPSNLNSTEEERVVLGSLLSGCDDSEKVMGLLRSKDFFFAVH
QKIFEGIQQSYASLNSIDAVSVMAASLNKPTAGITMGYLLSLSKDYRTEKCALQYARIVK
EKAALRSLLDVLGEAVKKIQNDQVSDVGQFLEDTTDRLASIYDFYNPEDKRAGAIESALG
GVIKAIQWRNQSPGVPLGIPTGFTKLDDITLGLQKGELIVVAGRPAMGKTAFVMNIVEHV
LQDDKLLVAVFSMEMSASQLLTRMISSVGRIKLRTIRTGRLEGEDQLNLKRVLGMLESSR
LVIDDSSNHTINSIRSKIIRWRAAHKTIGLIVIDYIQLMGDQAGSDSRAAEVAQISRSLR
SLAKELGVPIIVISQLNRSLEQRVDKRPIISDLKESGAIEQDADLILFVHREEVYNPTPK
NKGRAEIIIGKHRNGPTGSISLNFFGEYVQFRNS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgtctgatgaaggaggaaagaggacgcccccctcttttttaacaggtgtgccg
tctaatcttaacagcactgaagaagagagggttgtgctaggcagcctgctttcaggttgc
gatgatagtgagaaggtgatggggctgttgcgttccaaagatttcttttttgcagtccat
cagaagatatttgagggcatccaacaatcttatgcttctctgaactcaattgatgctgtt
tctgttatggccgcttctcttaacaaaccaacagcaggaattacgatgggttatctgctt
tctcttagcaaagattatagaactgagaaatgcgctctccagtatgctagaattgtgaag
gaaaaagcagcacttaggagcctgttagatgttttgggggaggcagtaaaaaagattcag
aatgaccaagtcagtgatgttgggcagttcttagaagacacaacggatcgtttggccagc
atctatgatttttacaacccagaagacaaaagagcaggggccattgaaagtgcattgggg
ggtgtcattaaggctatacagtggcgcaatcaatctccaggcgttccccttggaattcct
accggttttactaaactggacgatattactttaggcctccaaaaaggggaattaattgtt
gtggctgggaggcctgcaatgggaaagaccgcctttgtgatgaacattgttgagcacgtg
ctccaagatgataagcttttagttgccgtcttctcgatggaaatgtcagcctcccaactc
cttaccagaatgatcagctcagtaggaaggatcaagcttaggaccattagaacaggaagg
ttggagggggaagatcagctaaatcttaagagggtgcttggaatgctagagtcttctcgt
ttggtcattgatgacagcagcaaccacaccataaacagcatccgttctaaaatcatcaga
tggcgtgctgctcacaaaactataggccttattgtgattgattacatccaattgatgggg
gatcaggctggtagtgatagcagggcagcagaagtcgcacaaatctcccgttctctcagg
tctctcgcaaaagagttgggcgtcccaatcatcgtcatttctcaactgaaccgcagtttg
gaacagagagtggataagaggcccatcatttcagatttgaaagagtctggtgctatcgaa
caagatgccgacctgatcttgttcgtgcatcgagaagaagtatacaacccaacacccaag
aataagggcagagcagagataataattgggaagcataggaacggcccaactggctcaata
agcctcaacttctttggagagtacgtccaattcaggaacagctaa
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