Candidatus Tremblaya phenacola: TPPAVE_135
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Entry
TPPAVE_135 CDS
T02908
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tpj
Candidatus Tremblaya phenacola
Pathway
tpj03030
DNA replication
tpj03430
Mismatch repair
tpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPPAVE_135 (dnaX)
03430 Mismatch repair
TPPAVE_135 (dnaX)
03440 Homologous recombination
TPPAVE_135 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpj03032
]
TPPAVE_135 (dnaX)
03400 DNA repair and recombination proteins [BR:
tpj03400
]
TPPAVE_135 (dnaX)
Enzymes [BR:
tpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPPAVE_135 (dnaX)
DNA replication proteins [BR:
tpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPPAVE_135 (dnaX)
DNA repair and recombination proteins [BR:
tpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPPAVE_135 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_5
RuvB_N
AAA_22
DEAD
AAA_24
PIF1
AAA_assoc_2
AAA_14
AAA_28
ORC-CDC6-like
AAA_18
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
17622932
NCBI-ProteinID:
AGO28316
LinkDB
All DBs
Position
complement(113479..114588)
Genome browser
AA seq
369 aa
AA seq
DB search
MLDALAIRKRPKSFGDVVGQDVVLKTIISSLKTKRVHHSYCFIGPRGTGKTTVSRIFAKC
LNCLVGITTLPCNCCAACLDVEGGRKVDFVEIDAATHRGIEEMVSALEGSLYSPVLSRFK
IFVIDEAHQLTPQAFCSMLKVLEEPPGHAKFVLCSTDLTKIPTTILSRSINLYFKLISPD
QMGRFIASVLKEEGEQFSSDVPKILTELADGSVRDALSILDRTILASQNKLITQTNIIKA
FGIPTRELMTEILRAIIRKDLRSLLFLTEKAKYQSIPLPNIMSAVLSQMHELLNHQSNSI
TAPNKHKFWCWLIEEGAFASSNADVRSDALSNLKILMEGLKEMKLTDNHQTAFGIAMARA
ILNTKLNLN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgctagatgcccttgcgattagaaaacgccccaaaagctttggtgatgtggttgggcag
gatgttgtgctcaaaaccataattagtagccttaaaacaaaaagggttcaccattcttac
tgcttcattggaccaagaggcactgggaaaactacagtctcccgtatctttgctaaatgc
ctcaactgtttggttggcataacaaccctgccctgtaattgttgtgctgcctgccttgat
gttgagggaggcaggaaagtggattttgttgagattgatgctgcaacacacagagggatt
gaggagatggtgtcagccttagaggggagcttgtattctccagtcctctcaagattcaaa
atctttgtaattgatgaagcccaccaactaacaccccaggctttctgttcgatgctgaag
gtccttgaagaaccacctgggcatgctaagtttgtcctgtgcagcactgacctaacaaaa
atcccaaccaccattctctcaagatcaataaacctctacttcaaactgattagtcctgac
caaatgggaaggttcattgcttcagtcctcaaagaagaaggtgagcagttcagcagtgat
gttccaaaaattcttactgaactagctgatggaagtgtgagggacgccctttcaattttg
gacaggaccattttggcgtcccaaaacaaactcatcacccaaacgaacatcattaaagca
tttggcattccaacaagagagctgatgacagaaatcttacgagccatcattagaaaagat
ttgagatcgttgctctttctaactgaaaaagcaaagtaccagagcatacccctcccaaac
attatgagtgcagtgctgtctcaaatgcacgaacttctcaatcatcagtctaatagcatc
acagcacctaataaacataaattctggtgttggctgatagaagagggcgcctttgcctct
tccaatgcggacgtcagatctgatgccctttccaacctcaaaatcctaatggaaggcttg
aaagaaatgaagctaacagacaaccaccaaactgcttttgggattgcaatggcacgtgcc
attctgaacaccaaactcaacctcaactga
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