Candidatus Tremblaya phenacola: TPPAVE_206
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Entry
TPPAVE_206 CDS
T02908
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tpj
Candidatus Tremblaya phenacola
Pathway
tpj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPPAVE_206 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpj01007
]
TPPAVE_206 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpj03016
]
TPPAVE_206 (aspS)
03029 Mitochondrial biogenesis [BR:
tpj03029
]
TPPAVE_206 (aspS)
Enzymes [BR:
tpj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
TPPAVE_206 (aspS)
Amino acid related enzymes [BR:
tpj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TPPAVE_206 (aspS)
Transfer RNA biogenesis [BR:
tpj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TPPAVE_206 (aspS)
Prokaryotic type
Other AARSs
TPPAVE_206 (aspS)
Mitochondrial biogenesis [BR:
tpj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TPPAVE_206 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
17623004
NCBI-ProteinID:
AGO28375
LinkDB
All DBs
Position
complement(163640..165268)
Genome browser
AA seq
542 aa
AA seq
DB search
MMRWYNPEISSLVGKKVVMIGWAQKIRRHQSTTFVELKSSIGLSQIVCHHNLSSVFHALL
KTRIGYCLRVCGLAQRTASKQQPKREEVEVLCYEVRILNESCILPFVSSFASEEMRLKFR
FLDLRGGRTKDNLVLRHRTASLLHHFFGSEGFVQVDTPLLTKSTLEGAKEYSVPVRQSPT
KFFTLPQSPQLFKQLLMIGGVTKYYQIAKCFRDENLRSDRQPEFSQIDCEVSFGKADEII
GLVNRLISFLFSNILRAHFLTAFPAEPYSAALKQYGSDKPDLRIGLKVVAFRSPQTKASF
IMVRHLNLNIKLRFQKAFGALPIISMLSDSTNLESSSILKESFPQPRIQNFILDFNLKKG
ASLFLLAGQNIWAVSVLNKMIKGMGPSHFGKSRGYFRPGWKVLWIVKFPLFRFSHQENRI
VSDHHPFVRPSNLFDFNNSPFQSRSESYDIILNGQELGGGSVRINDGPLQSAVLALLGTS
FQQLERVSFFLKALSFGAPPHAGIALGLDRLLMLITSSPSLRDVVAFPKTQRTNCLLTNA
PD
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatggtataatccagaaattagtagtttggttggcaaaaaggttgttatgatt
ggttgggctcagaaaataagaaggcaccaaagcacgacctttgttgaacttaaatcatca
attgggttgtctcaaatcgtttgccatcacaatcttagttcagttttccatgcccttctc
aaaacaagaattggatattgcctccgcgtttgtggtttggcacaacgcacagcttcaaaa
caacagcctaaaagagaagaggttgaggtgctttgttatgaggtcaggattttgaatgag
tcctgtatcctgccctttgtttctagttttgcatcagaagagatgagactgaagttcagg
ttcttggatctgagagggggcagaactaaagacaatctggttttgaggcacagaaccgcc
tctcttttacaccacttctttgggtctgagggatttgtacaagtcgacacccctctacta
accaaaagcacacttgaaggtgcgaaagagtactctgtgcctgtgagacaatccccaaca
aagtttttcacgcttccccaatccccacagctcttcaagcagctactaatgattggtggg
gtgaccaagtattaccaaatagctaaatgttttagggacgagaacctcagatctgacagg
caacctgaattctctcaaattgattgtgaagtatcgtttggaaaagcagatgaaataatt
gggttagttaacaggctgattagtttcctcttctcaaacatcctcagagcccactttcta
acagcttttccggctgaaccttattcagccgcattaaaacagtatggcagtgataaacca
gacctgcgaatcggtttgaaggttgttgcttttagaagcccacaaaccaaagccagtttt
attatggttcggcatctgaatctgaatattaagttgaggttccaaaaagcttttggggcc
ctcccaatcataagcatgctgtctgatagtacaaacttggagagcagtagtattttgaaa
gaaagttttccccaacccagaattcagaattttatcttggattttaatcttaaaaagggt
gccagtttatttttgttagcaggccaaaacatttgggcagttagtgttctgaacaaaatg
ataaagggcatggggccctctcattttggcaaaagcagaggctattttagaccggggtgg
aaggtgctttggattgttaaattcccattgttcagattctcacaccaagagaataggatt
gtctcagatcatcacccttttgtcaggccttccaacctttttgattttaataacagcccc
tttcagagcaggtcagaatcttatgacatcattcttaacggccaagaattaggaggtggc
tcagtgagaataaatgacggacccctccaatctgctgttttggcattgttaggcacttct
ttccaacaattagaaagggtgtctttttttctcaaagctctcagtttcggtgccccaccc
catgctggcatagctttaggattggacaggctgttaatgctaataacctcctctccttct
ttgagggacgtggttgctttccctaagacccagagaacaaactgccttcttacaaatgca
ccagattag
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