Treponema putidum: JO40_00865
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Entry
JO40_00865 CDS
T03278
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpk
Treponema putidum
Pathway
tpk03420
Nucleotide excision repair
tpk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JO40_00865
03430 Mismatch repair
JO40_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpk03400
]
JO40_00865
Enzymes [BR:
tpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JO40_00865
DNA repair and recombination proteins [BR:
tpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JO40_00865
MMR (mismatch excision repair)
Other MMR factors
JO40_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
PcrA_UvrD_tudor
ResIII
Exo70_N
DEAD
MPH2
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIN92852
LinkDB
All DBs
Position
188535..190772
Genome browser
AA seq
745 aa
AA seq
DB search
MAQPDYLNILNEEQLAAVKHQGSPLLILAGAGSGKTRVITTKIAYLIAEHNIGPERILAV
TFTNKAAKEMSERAAHLDKRAERAMIRTFHSFGAWILRMYAEWAGLSHNFTIYDDDDSLS
LLTQASPTLTKNAARGIIKKISRAKDYCLLPDDPLLQEVDPNPEFAKIYAEYQKRLKETG
NVDFGDLIMIPVMLLKENPQIRTSLQNRFSVIMVDEYQDSNIAQFEFLKVLTGENTYICV
VGDDDQSIYRFRGAEVQNILTFADTFKNTKIIRLEKNYRSYSEILAVADSVVKKNTGRLG
KTLVAERGKGQKPHIYFLPNQETEAELCARLISQEVENGGAYSDWAVLYRTNAQSLNFET
DFLHKKIPYQVIGTLKFYEREEIKDALAVLAFISNGRDEVALRRIINKPARGVGEITQKK
LIDLSRELMFSQKSDELMLESKDDYISAMSALINSVSLTKKAKEGLKNFLNTIKELRSII
EAGDIFFKKEEPKGEGLAPFIYEVLKQSGFAEYYESVDSASGTQKTANLNELANTASLYD
FSVKGLSEFLEHIELDRSLAGSEEKKDSVNLITIHNTKGLEFKNVIITGLETGVFPRDNG
NFDELEEERRLMYVACTRAKDALYMTSCASRRLYGSLSFTQPSRFIFEIDQGLVNISEAS
SSYSTFSGSFGKQIPADFSTKKEEHPLLSKWKKGEKIYHDDYGYGAIIKADASSGELVVN
IQFETGLIKRFMPEYQANDMTIIKD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
ttggctcaaccggattatttgaacattcttaatgaagagcagcttgcagctgttaagcat
caaggctctcctcttttgattcttgcgggcgcaggctccggaaaaacacgggttattaca
actaagattgcataccttattgccgaacataatatcggacctgaacggatccttgccgta
acctttacaaacaaggctgccaaagaaatgtccgaaagagcggctcatctggataaaaga
gcggagagggcaatgatcagaacctttcattcatttggagcatggatactacgcatgtat
gcggaatgggcagggctctctcataattttacaatctatgatgatgacgactctctttcc
cttttgacccaagcctcccccactcttacaaaaaatgctgcccgcggtatcataaaaaaa
atttcgcgtgcaaaggattattgccttcttcccgatgatccgcttttacaggaagtcgat
cctaatcccgaatttgcaaaaatctatgccgaatatcaaaagagattaaaagaaaccgga
aacgtagacttcggagatctcatcatgattcccgttatgctcttaaaagaaaaccctcaa
ataagaacatctcttcaaaaccggttttccgtaataatggtcgatgaatatcaggactcg
aacatagcccaatttgaattcttaaaagtcctcacaggagaaaatacttatatctgcgtt
gtaggagacgatgaccaatcaatctaccgtttccgcggtgccgaagttcaaaacatatta
acctttgccgatacttttaaaaacacaaaaataataaggctcgaaaaaaattaccgctca
tactcggaaattcttgcagtcgcagattccgttgtaaaaaagaatacgggccgtctcggt
aagacccttgttgccgaaagaggaaagggtcaaaaacctcatatttattttttgcctaat
caggaaaccgaggcggaactttgtgcccgccttatatcgcaagaagtcgaaaacggagga
gcatattccgactgggctgtcttgtacaggactaacgcccaatccttaaattttgaaacg
gattttttacacaaaaaaattccatatcaggttataggtactttaaaattttatgagcgt
gaagaaataaaggatgcgcttgccgttcttgcctttatctcaaacggaagggacgaggtt
gctttaaggcgtatcataaataaacctgcacgaggtgtaggagaaattactcaaaaaaaa
ttaatcgatctttcccgagaacttatgttttctcaaaaaagcgatgagctcatgttggag
tccaaggacgattatatctcggccatgtctgccctcattaattcggtctccctcacaaaa
aaagcaaaagaaggcttaaagaattttttaaacaccataaaggaattacgcagtataata
gaagccggagacatcttttttaaaaaagaagaaccgaagggcgaaggcttagctcctttt
atctatgaggttttaaaacaatcgggctttgccgaatattacgaatcggtagactctgcc
tccggcactcaaaagacggcgaacttaaatgagcttgcaaacacagcatcgctttacgat
ttttcggtaaagggcttgagcgaatttttagaacacatcgaattggatagaagccttgcc
ggctccgaagaaaaaaaagattccgtaaacctcattaccattcataacacgaagggcttg
gaatttaaaaacgtaattatcacgggccttgaaacgggagtctttccccgcgacaacgga
aacttcgatgagcttgaagaagaaagaagacttatgtatgtagcctgcacccgtgcaaag
gatgctctctacatgacaagctgtgcttcccgccgcctttacggcagcctaagctttacc
cagccaagccgctttatcttcgaaatagatcaaggccttgtaaacatctcggaggcctca
tcttcttattctactttttcaggaagtttcgggaaacaaatacctgccgattttagcaca
aaaaaagaagagcatccccttctttccaaatggaagaagggagaaaaaatttatcacgat
gattacggctacggggcaataattaaggccgatgcttcaagcggagaacttgtagtaaat
atccaatttgaaaccggccttataaaacgctttatgcctgaatatcaggcaaacgatatg
acaataataaaagactga
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