Treponema putidum: JO40_01040
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Entry
JO40_01040 CDS
T03278
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tpk
Treponema putidum
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpk03400
]
JO40_01040
DNA repair and recombination proteins [BR:
tpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JO40_01040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
ChlI
Zn_ribbon_LapB
AAA_25
Lon_C
DUF7125
DnaB_C
AAA_22
nSTAND_NTPase5
AAA_16
AAA_14
NACHT
Rad51
AAA_24
nSTAND3
NTPase_1
DUF7129
DAP3
DUF7837
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AIN92881
LinkDB
All DBs
Position
complement(224889..226274)
Genome browser
AA seq
461 aa
AA seq
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MAKKKTGDLAHRCNNCGYTQARWLGRCPECGEWNTFEEVTINQDYSATERSIAEKFVKEA
HSVPLDAIEANDAVRLSTGIAEFDRVLGGGAVKRSAILIGGEPGIGKSTLLLQAASASSS
GSVKKVLYVSGEESGGQIRSRADRLNLPLKNIELLCTCRLEDVERVLNKVNPVFVIIDSI
QTMYSADAGAVPGTINQLKLCAHELVSWVKERDSVLFLTAHVTKDGNIAGPKVLEHLVDT
VISFERTEDDVRFLRALKNRFGSVDELGIFSMDESGLKAIDDPSSLFITNRTGPLPAGSA
AVPVCEGSRVFMVEIQALTVPAKGAVTRVFSDKIDSARVSRIAAVLEKRIGLQFSDQDIY
VNVAGGIRLKEPAADLAIALALYSARANIPAQKEGAYIGELSLAGEIRSVKKLKQRIKTA
QSMGFTKVVSPPPSDSEAGDINISQLFKAEDLSSAIKKVFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaaaacaggagaccttgcacaccgctgcaacaactgcggttacactcaa
gcccgctggctaggccgatgtcccgaatgcggcgaatggaatacctttgaagaggttaca
atcaatcaagattattccgcaaccgaaagaagcattgcagaaaaatttgtaaaagaagct
cattccgttcctcttgatgctattgaagcaaatgatgccgtccgcctttctacggggatt
gcggaatttgacagggtgctgggaggtggtgccgtaaagcgttcggcaattttaatcgga
ggagagccgggcataggaaaatcgacactgctcttacaagctgcttcggcctcttcttcg
ggctccgtaaaaaaagttctgtatgtttcgggagaagaatcgggcggacaaatccgttcc
cgtgccgacagactgaatcttcctttaaaaaatattgaacttttatgcacttgcaggttg
gaagatgtagagagagttttaaacaaggtaaatcccgtttttgttataatcgattcaatt
caaactatgtattccgcagatgccggagccgttccgggaactataaatcaattaaagcta
tgtgctcacgagcttgtatcttgggttaaagagagggacagcgttttgtttttaactgcc
catgtaacaaaggacggaaacatagcggggcctaaggttctcgaacacctcgtggatacg
gtcatttcctttgagagaacagaagacgatgtgcgttttttgcgtgccctaaaaaaccgc
ttcggctcggttgacgagcttggaattttctcgatggatgaaagcggtttaaaagccata
gatgacccgtcttcattatttattactaatcggacagggcctctgcctgcgggctctgct
gccgttcccgtctgcgaggggagccgtgtttttatggtagaaatacaggctcttacggtt
cctgccaagggcgcggttacaagggtcttttcggacaagatagattccgcccgcgtcagc
cgcatcgccgccgttttggaaaaaagaataggcttacaattttcggatcaggatatttat
gtaaacgttgcaggaggtataaggcttaaagaacccgccgccgacctcgccatagcactt
gctctttattccgcccgtgcaaatatacctgctcaaaaagaaggagcctacataggcgaa
ttaagcctcgcaggagaaatccgaagcgtcaaaaaattaaagcaaagaatcaaaaccgcc
caaagcatgggctttacaaaagtcgtgtcgcctcctccttccgattctgaagcgggagac
ataaacatctcacagctttttaaagcggaagatttaagctcggcaatcaaaaaggtgttt
gggtaa
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