Treponema putidum: JO40_02195
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Entry
JO40_02195 CDS
T03278
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpk
Treponema putidum
Pathway
tpk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JO40_02195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpk03021
]
JO40_02195
03400 DNA repair and recombination proteins [BR:
tpk03400
]
JO40_02195
Enzymes [BR:
tpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JO40_02195
Transcription machinery [BR:
tpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JO40_02195
DNA repair and recombination proteins [BR:
tpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JO40_02195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
AIN93080
UniProt:
A0AAE9MV54
LinkDB
All DBs
Position
complement(480865..481920)
Genome browser
AA seq
351 aa
AA seq
DB search
MARKNLLKGFKKPKGLEFAQQESTESYGKFTASPFETGFGTTIGNCLRRILLSSIQGYAI
SAVLITSHDADGVPHTISSEFENIPNVSEDTLEILNKLKQIRLRLSDESEQGDFHFEFKG
PASITSKDFAVEGQLEILGEPFHVMELMKGANVSFDVQVDFGRGYVPAEVNEKYIEIVGT
IPMDAIYGPVLKVSYAIEPCRVGQRNDYDKLILEIWTDSTVRPEDVLGEAAKIAKDHFSI
FINFNEGDYLGEDDDIDEEAAIKQLLATSINTLDFSVRAKNCLDSAGIKTLGELAQKTED
EIESMRNVGRMTLNEIHAKLAEYNLRLGMTDYSHLKNTIKVSRQKEETDEA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaaaaatcttttaaaaggatttaaaaagccgaaaggtttggaattcgctcag
caagaatcaaccgaaagctatggtaagtttacggcctccccttttgagacaggttttgga
acaacaatcggaaactgtttgaggagaatcttattgtcttcaattcaaggttatgctata
tcggcagtgcttataacatcgcacgatgctgacggtgtgcctcatacaatttcaagtgag
tttgaaaatattcctaacgtttcagaagatacgctggaaattttaaataaactaaagcag
atccgtctccgtttatcggatgagtcggaacaaggtgactttcattttgaatttaagggg
ccggcgtcgataaccagcaaggattttgccgttgaagggcagcttgaaattctaggtgag
ccttttcatgttatggaactcatgaagggcgctaatgtttcgtttgatgttcaggtagat
ttcggccgaggctatgtaccggcagaagttaatgaaaaatacattgaaatcgtcggaact
attcctatggatgcaatctacggtcctgttttaaaggtaagctatgctattgaaccttgc
agggtagggcaaagaaacgattacgataagctaattctcgagatttggactgatagcaca
gttcggcctgaagatgttttaggtgaagctgcaaaaattgcaaaagatcatttttccatc
tttattaattttaatgagggcgattatcttggtgaagatgatgatattgatgaagaagcg
gcaataaaacagctcttggctacttcaataaatactctcgatttttccgtcagggctaag
aattgtttggattcggccggtattaaaactctaggcgaactggctcaaaagactgaagat
gagatcgaaagtatgcgcaatgtcggcagaatgactttaaatgaaattcatgctaagctg
gcggaatacaatttgcgcttgggtatgactgattacagtcatctaaaaaatacgataaaa
gtatcaagacagaaggaagaaacagatgaagcataa
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