KEGG   Treponema putidum: JO40_04385
Entry
JO40_04385        CDS       T03278                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
tpk  Treponema putidum
Pathway
tpk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JO40_04385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpk03019]
    JO40_04385
Messenger RNA biogenesis [BR:tpk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JO40_04385
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd KH_2 SPAN
Other DBs
NCBI-ProteinID: AIN93443
UniProt: A0AAE9SK58
LinkDB
Position
923207..924736
AA seq 509 aa
MNWILYVILPAVCVILGWTIRWLYARFQLSASEQRAERILQEAIKDAEAQKKEFFLEAKE
QLIREQKQQERENRERRSDLQRFERRLTQKEEILDKRVETVEKQEKELVKREAALDERTE
FLSGEEERYREELEKISGLTQQQAKDLIIRDLETEAKHDAVTIINKIEQEAQLTAEKKAR
DILITTIQRLATETASDITVSTVSLPSDEMKGRIIGREGRNIRALETLTGVDIIIDDTPE
AVVVSCFDPVRKEIARVALERLILDGRIHPARIEEIVQKVTREISQKVYEEGEKVLFDLG
IHNMNQEGVRALGRLYFRTSYGQNVLQHSKEVAIIAGMIASEIGANVEIAKRGALLHDVG
KGAETDSDKNHAEIGMELAKKINEDPRVVNAVGAHHNDIEPTCIESVIVQIADAISAARP
GARRETMDNYVKRLENLEQLAEGFSGVEKAYAIQAGRELRVVINNEKISDADTKILARDI
AKKIENDLQYPGRIRVTLIRETRIVEYAR
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaattggattttgtatgtcatccttcctgctgtctgtgtaattcttggatggacgatt
cgctggctttatgccagatttcaactatctgcttctgaacaacgtgcagaacggatttta
caggaggcaattaaagatgccgaggctcaaaagaaggaattctttcttgaagcaaaagag
cagctgattcgggaacaaaaacagcaggaacgggaaaatagggaacgccggagtgatctc
cagcgcttcgaacgcaggttgacacaaaaagaggaaatcctcgataaacgtgtcgaaact
gttgaaaaacaagaaaaagagcttgtcaagagggaagccgcacttgatgagcggacggaa
tttttaagcggtgaagaagaaagatacagggaagaattggaaaaaatttccggtttgacc
cagcagcaggcaaaagatttgattatccgcgatttggaaactgaagcaaagcatgatgca
gttactattataaataagatagaacaagaagctcagttgacggcagaaaaaaaagcgagg
gatattctaattactacgattcaacgtcttgcaacggaaacggccagcgacattactgtc
tcaacggtcagcttgcccagcgatgagatgaaaggaaggattatcggccgcgagggacgc
aatatccgagccttggaaactcttaccggtgtggacataattatcgatgatacccctgag
gctgttgtagtatcttgttttgaccctgtgcgcaaagaaattgcaagggttgctttagaa
agattaattcttgacggccgaattcatccggcacgtattgaagaaatcgttcaaaaggta
accagagaaatttcgcaaaaggtttatgaagaaggagaaaaggttctatttgacctaggc
atccataacatgaaccaagaaggcgtaagggcattgggaaggctttattttagaacaagc
tatggacaaaatgtgcttcagcattctaaagaagtagccataatcgcgggaatgattgca
agcgaaatcggtgcaaacgtcgaaatagcaaagcgaggcgccttgctgcatgatgtcgga
aagggtgcagaaaccgattccgataaaaaccatgccgaaataggaatggaacttgcaaag
aagatcaatgaagatccgagggttgtaaatgccgtaggcgctcatcataatgatatagaa
cctacttgcattgaatcggtaattgtacagattgcagatgcgatttcagccgcccgtccg
ggcgcaagacgagaaactatggataactatgttaagcgtcttgaaaaccttgagcagctg
gctgaaggttttagcggagttgaaaaggcctatgcaatccaagccggaagggaattgagg
gttgttatcaacaacgaaaagatttccgatgccgataccaagattttggcccgggacatt
gcaaaaaaaatcgaaaacgatttgcagtaccccggaagaatccgcgtaacccttatacgc
gaaacacgtatcgtagaatacgcccgctaa

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