Treponema putidum: JO40_05275
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Entry
JO40_05275 CDS
T03278
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
tpk
Treponema putidum
Pathway
tpk00500
Starch and sucrose metabolism
tpk01100
Metabolic pathways
tpk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JO40_05275
Enzymes [BR:
tpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JO40_05275
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Isoamylase_C
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
AIN93595
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Position
complement(1142025..1144181)
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AA seq
718 aa
AA seq
DB search
MMNMNDLSFFQGKTDPLGAKLSRDGVNFSIFSRNAKEIVLHLFEAVDDADPAVSYRLDPK
VNKTGDVWHVFAAGLKSWAFYLYTADGEFSPASGFLFDENNYLLDPYAKLISSHSVFNSE
QTFNQRESKASGGKNQHKRTAKGFPKCVVVDDREFDWQGDKPLNIPLQNCVIYEAHVKGF
SFLNDKISPIKRGKYSGLVELIPYLKNLGITSLELLPVFDFDENENMNVNPKTGIRLKNY
WGYSTISFFAPKALYAEDPGNAVNEFKFMVREFHKAGIEIILDVVFNHTAEGNENGPVFS
FKGLDNSIYYHLEDNKLYYKNFSGCGNSLKASEIPVIKFILDCLRYWVTEMHVDGFRFDL
APVLARDKTGGIDYNAFIIQAIADDSVLRSTKIIAEAWDAAGAYMVGKFPGRWAEWNDLF
RNSVREFWLKPNPDIRHLAARVTGSADLYSQKGRRPYQSINFVCCHDGFTLCDLLSYSEK
HNEENGENNRDGSNENLSYNHGIEGPASVEIERMRMRSAKNILTTLILSAGTPMMNMGDE
VFRTQNGNNNTYCQDNEISWFDWELLNENKDLLEFTKKLINLRKAHFSFLRNHFFTGVPK
SNGSPNDITWFDYNAQSPNWGVPSNFLAFLIDGNKINLESDEDDNDFYVMVNSYNNDITV
KLPPPSLSGTSWYRLIDTSYTNGKDFSDEEKAEQIMNQQIYVVLARTTVVLISKYGHL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatgaacgatttatctttttttcaaggaaaaactgatcccttaggtgcaaaa
ttaagccgagatggagtgaatttcagcatcttttcacggaatgcaaaagagatagttcta
cacttatttgaagcagtagatgatgccgatcctgccgtatcttatagacttgaccctaaa
gtaaataaaactggtgatgtttggcatgtgtttgcagcgggtttaaaaagttgggctttt
tatttatatacggccgatggagagttttcacctgcatcgggtttcttattcgatgaaaat
aattacttgcttgacccttatgcaaaactcataagttctcattccgtatttaattcggaa
caaacttttaaccaaagagagagcaaggcttcaggcggtaaaaatcagcataaaagaacg
gcaaagggtttcccaaaatgtgtagttgtagatgatagggaattcgattggcagggagat
aagcccttaaatattcctcttcaaaactgtgtaatatatgaggctcatgtaaaaggcttt
tcttttttaaacgataaaataagtcctataaaacgaggtaaatattcaggccttgtagaa
ctcattccatatttaaaaaatctgggtatcacatctcttgagctcttgcccgtttttgat
tttgatgaaaacgaaaatatgaatgtaaatcctaaaaccggcattcggctaaaaaactat
tggggctacagtacaatttctttttttgcacctaaggccctctatgccgaagaccctggc
aatgcagtaaacgagtttaaatttatggtcagggaatttcataaagcaggtatcgagata
atcttagatgtggtgtttaaccataccgcagaaggaaatgaaaacggccccgttttttct
tttaagggattggataattccatttactatcatcttgaagataataagctctattataaa
aacttttcaggctgcggtaacagtttaaaagcttcggaaattccagttataaaatttata
ttggattgcctgcggtattgggtaactgaaatgcacgtggacggcttccgttttgatttg
gctcctgttctggcccgcgataaaaccggaggtatagattacaacgcttttatcatacag
gccattgcagatgattccgtgcttcgttctacaaagattatagctgaagcttgggatgca
gccggtgcgtacatggtaggaaaatttcccggacgctgggcggaatggaacgatttattc
cgtaactccgtcagagagttttggctgaagcccaatcctgatataagacacttggcagcc
agagtaaccggttctgcggatttatattctcaaaaaggcagacggccttatcagtcaatc
aattttgtttgctgtcatgacggctttactctttgcgatttattaagctattccgaaaaa
cataacgaagaaaatggggaaaataaccgggacggctcaaatgaaaatttgagctataat
catggaatagaagggcctgcatctgtcgaaattgaaagaatgcggatgaggtctgcaaaa
aatattttgacaactcttattctttcagccggcacacctatgatgaatatgggagatgaa
gtattccgtacacaaaacggaaacaataatacttattgtcaggataatgaaatatcttgg
tttgattgggagcttttaaatgaaaataaggacttgctcgaatttaccaaaaaacttatc
aatttaagaaaggctcatttttcttttttaagaaatcatttttttacaggtgtacctaaa
agtaacggaagcccaaatgatattacatggtttgattataatgcacaatccccaaattgg
ggagtgccttcaaattttttagcatttttaatagacggcaataaaattaatttggaaagc
gacgaggacgacaatgatttttatgttatggtaaatagttataataacgacataacggta
aagctgccccctccatctttaagcgggacatcttggtaccggctgatcgacacttcttac
acgaacggaaaagatttttcagatgaagaaaaagccgagcagattatgaaccaacaaata
tatgtagtgcttgcacgtacaactgtagttttaatttcaaaatatgggcacttatag
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