Treponema putidum: JO40_06025
Help
Entry
JO40_06025 CDS
T03278
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tpk
Treponema putidum
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpk03032
]
JO40_06025 (gyrB)
03400 DNA repair and recombination proteins [BR:
tpk03400
]
JO40_06025 (gyrB)
Enzymes [BR:
tpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JO40_06025 (gyrB)
DNA replication proteins [BR:
tpk03032
]
Prokaryotic type
DNA Topoisomerases
JO40_06025 (gyrB)
DNA repair and recombination proteins [BR:
tpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JO40_06025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AIN93721
UniProt:
A0AAE9MXU5
LinkDB
All DBs
Position
complement(1273155..1275071)
Genome browser
AA seq
638 aa
AA seq
DB search
MTKSNYSANNITVLKGLEAVRKRPGMYIGSTGPDGLHHLVYEVVDNCIDEAMAGFCDKIL
VVLEPNDIVRVEDNGRGIPVDIHPTEKISALELVLTRLHAGGKFDKGSYKVSGGLHGVGV
SVVNALSVWMEAKVYKDGFEHYAKFEKGSIIEPVKKIGETEKSGTVIRWAADSSIFTETT
VYNFEVLATRLRELAFLNSHISITMRDERLSTPKEVTFAFGGGISQFVSYLNESKQVFPK
SPVFIEGEKNDILCEVAIQYNDGYNENLLSFVNDINTREGGTHLEGFKTALTRVMNDFLK
KYPKLVKKMDKEEKLTGEDVRAGLTAIVSVKVPEPQFEGQTKTKLGNSDVRGIVDSFVNE
KLTLFFEQNPSEVEKVLEKCVAEAAARIAARKAKEATRRKSGLDSFGLPGKLADCSLKDP
ESCEVYIVEGDSAGGSAKKGRDSKTQAILPLWGKMLNVEKTRLDKVVNNEKLQPIIATLG
TGIGKDFNIEKLRYHKVIIMADADVDGSHIRTLLLTFFFRYMPQVIEKGHVYLAMPPLYK
ISHNKKEWYVYNDDERDSVLDQIGRGNNAAVQRYKGLGEMDGTQLWETTMDPARRKMMRV
TLPDAVEADRIFSTLMGEEVEPRRKFIEENAVYANLDV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcaaattattcggcaaataatattacggttttaaagggcttggaagcggtc
agaaaaaggccgggtatgtatatagggtctacagggccggacggtcttcatcatcttgtt
tatgaggttgtagataactgtatagatgaggctatggccggtttttgcgataaaattttg
gtagtgcttgagcctaacgatattgtccgtgtagaagataacggccgaggaatccccgta
gacatccatcccaccgaaaaaataagtgccttagagctggttttaacccgccttcatgcc
ggaggtaagtttgacaagggttcttacaaggtttcaggcggtttacacggtgtaggcgtt
tcggttgtaaacgctctttccgtctggatggaagccaaggtttacaaggacggctttgag
cattatgcaaagttcgaaaaaggctccattattgagcccgtaaaaaaaataggagaaacc
gaaaaaagcggtacggtcatcaggtgggcagcagattcttccatctttaccgaaactaca
gtatacaattttgaagtgcttgcaacccgcttaagggaattggcctttttaaacagtcat
atttccattacgatgagggatgaacgcctttctaccccaaaagaggttaccttcgctttt
ggaggcggaatatcgcagtttgtttcttatttaaacgaatcaaaacaagtttttccgaaa
agtcccgtttttatcgaaggcgaaaaaaacgatattctctgtgaggttgccatccaatac
aatgacggatataacgaaaacctcctttcgtttgtaaacgatataaacacccgcgaagga
ggaactcatcttgaaggttttaaaacagccctcacccgtgtaatgaacgactttttaaag
aagtatcctaaacttgtaaaaaagatggataaggaagaaaaacttacgggcgaagatgtc
cgtgcaggtcttaccgccatcgtttccgtcaaggtacccgaacctcaatttgaaggacaa
acaaaaacaaagttgggcaacagcgatgttcgaggtatagttgactcatttgtaaacgaa
aagctcaccttattttttgagcaaaacccgagcgaagtggaaaaggtcttggaaaaatgc
gtcgcagaggccgccgccagaattgctgcaagaaaggcaaaggaagctaccagacggaaa
agcggtttggacagtttcggccttccggggaaacttgcagactgttctttaaaggatcct
gaatcttgcgaagtttacatagttgagggagactctgcgggcggttctgcaaaaaaagga
agggacagcaagacgcaggccatcctgcccctttggggaaaaatgcttaatgtcgaaaaa
acccgtctcgacaaggtggtaaataacgaaaagcttcagcctattattgcgaccctcgga
accggcatcggaaaagattttaatatagaaaaattacgctatcataaggttataataatg
gccgatgccgatgttgacggctcccatatccgaacccttcttttaaccttcttttttagg
tacatgcctcaggttatcgaaaaaggccatgtgtaccttgccatgcctcctctttataaa
atttctcacaataaaaaagaatggtatgtttacaatgatgatgaaagagattccgttttg
gaccaaataggacgcggaaacaatgcggccgttcagcggtacaagggtttgggcgaaatg
gacggaacccagctttgggagacaacaatggatcctgcaagacggaaaatgatgagggtt
accctccccgatgccgttgaagccgacagaattttcagcaccctaatgggcgaagaagtc
gagccccgacgaaagttcatcgaagaaaatgccgtctatgcaaatctggatgtgtga
DBGET
integrated database retrieval system
