Treponema putidum: JO40_08625
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Entry
JO40_08625 CDS
T03278
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpk
Treponema putidum
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpk03016
]
JO40_08625
Enzymes [BR:
tpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JO40_08625
Transfer RNA biogenesis [BR:
tpk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JO40_08625
Prokaryotic type
JO40_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIN94158
LinkDB
All DBs
Position
complement(1808749..1809786)
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AA seq
345 aa
AA seq
DB search
MELNKNLIVPFAKQAGLTSFASMSAVKKALLTKKVGHTGTLDLFADGLLVLLTGKLTRLA
DIISAEKKTYEAWIEFGTETDTLDPEGEPVLTAPLPSYKNLAESIPSFLGKILQRPPEFS
AIKINGKRASDRTRSGEKIEIAEREIEIVKLELKRIITDGGLEFTEKDFFNINTELKIKY
THISVECSKGTYIRSLARDLARKASSCAHVRALRRTAVGTFKLEDAAGFSILNDFSAAPE
KFYKKFYKQKEIDFSEIKAKSIIFSPEAADNIGLAKIFLDQSYLNDFYDGKKMRFNWFLN
ADEVLEKAKNSGIENKKICVFCNNLWTGIIGINKNYLKYETVIKN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaataaaaaccttatcgtcccgtttgcaaaacaagcgggacttaccagcttt
gcttcaatgtcggcggtaaaaaaagcccttttaacaaaaaaggtaggccacacaggaact
cttgatctttttgcagacggtcttcttgtgcttcttacaggaaagctaacccgcctcgcc
gatataatttcagccgaaaaaaaaacctacgaagcatggatagaattcggaacagaaacg
gataccctcgaccctgaaggcgagcccgttttgaccgccccgctcccctcttacaaaaat
ttagcggaatccataccctcttttttaggaaaaatactccaaagaccgcccgaattttct
gcaataaaaataaacggaaaacgggcatccgacagaaccagaagcggcgaaaagatagaa
attgcagagcgggaaatagaaattgttaaacttgagcttaaaagaataattaccgatggc
ggtctggaatttacggaaaaagatttttttaacataaacaccgagctaaaaataaaatat
acccatataagcgtagaatgctcaaaaggaacctacatacgctcccttgcaagagacctt
gcaaggaaggcatcttcttgtgcccatgtcagggctttaagaagaactgctgtaggaacc
tttaaacttgaagatgcggcaggttttagcattttaaatgatttttctgcagcgccggaa
aagttttataaaaagttttataaacaaaaagaaattgatttttctgaaataaaggcaaaa
tctattattttttcccctgaggcggcagacaacattggtttagctaaaattttcttggat
caaagctatttaaatgatttttatgacggaaaaaagatgagatttaattggtttttaaat
gccgatgaagttttagaaaaggccaaaaactccggcatagaaaataaaaaaatatgcgtc
ttctgtaataacttatggaccggtatcataggaataaataaaaactatttgaaatatgaa
accgttataaaaaattaa
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