Treponema putidum: JO40_08640
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Entry
JO40_08640 CDS
T03278
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
tpk
Treponema putidum
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpk03021
]
JO40_08640
03009 Ribosome biogenesis [BR:
tpk03009
]
JO40_08640
Transcription machinery [BR:
tpk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JO40_08640
Ribosome biogenesis [BR:
tpk03009
]
Prokaryotic type
rRNA transcription factors
JO40_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
Zn_ribbon_3
UPF0547
HypA
DUF7129
Zn_Ribbon_1
KH_NusA_C
DZR
Zn_ribbon_DZR_6
Zn_ribbon_DUF2089
S1
DUF7130
HHH_5
Mre11_C
Zn_ribbon_15
Zn_ribbon_LysW
DUF7560
iHKD
Cas12f1-like_TNB
Zn_ribbon_8
Zn_ribbon_6
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-ProteinID:
AIN94161
LinkDB
All DBs
Position
complement(1812863..1814347)
Genome browser
AA seq
494 aa
AA seq
DB search
MSEGIIEAIRDFAQEKGIDDDFVLHIVEQALKASYKKQFGTDANAVFNEETGKIYSKKII
TEHAKNPVFEISLKEAKNLAPDCEAGDELLVEVDPKTFGINSVRVGMQRATQCIREIQKD
SLYAEYSTKVGEIIIGYYHRERNGNIYVDLGKVEGLLPKKYQSPRDHFGRNSAAGEESRI
KALVREVKKHRQSNVVQLILSRTDAEFVRRILELEVPEIENGIVKIHNIVREPGYRTKIS
VSTDRDDIDPVGACVGAKGARIQAVIAELDDEKIDILPYSEDPKAYIKSALSPAEVIDVM
ILDAEKRLALAIVSDSQLSLAIGKQGLNVRLANRLVDWNIDVKTEEQFKQMDIYTDARKA
VENLFTDDTGDEDEYEEISNVSELPSITEDILTVLYNNEIEDIQDLINMEDDEIRKLEGL
TAEMADTLLDIIANAVEVVEDDEDETNEESKPVLEHEDETEEFECPECGHKITIDMTKCP
NCGVDLAFEYEDEE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagggaataattgaagcaattcgagactttgcacaagaaaaagggattgacgat
gattttgttttacacattgtagaacaggctctaaaggcatcctacaaaaaacaattcgga
acggatgccaatgccgtgttcaatgaagaaacaggaaaaatatactcaaaaaaaataata
acggagcatgcaaaaaatcccgtttttgagattagtctgaaagaagcaaaaaatcttgcc
cccgactgtgaagcaggtgatgagctcctagttgaagttgatcctaaaacattcggcata
aactcggtcagggtcggaatgcaaagggcgacccagtgcatcagagaaatacaaaaagat
tctctttatgcagaatacagtacaaaggtaggcgaaattatcatcggctactaccacaga
gaacggaacggaaacatatacgtagatttgggaaaggttgaaggcttgcttcctaaaaaa
tatcagtccccgagggatcactttggccgaaattcggctgccggcgaagaatcaagaata
aaggccctcgttagggaggtaaaaaaacaccgccagtctaacgtagtacagctaatcctt
tcgagaaccgatgcggaatttgtaagacgtatattggaattggaagtaccggaaattgaa
aacggaatagtaaaaatacataacattgtacgtgagcccggttacagaacaaaaatatca
gtttcgacggatagggatgatatagatcctgtaggagcttgtgtcggcgcaaagggtgcc
agaattcaagcggttattgccgagctggatgatgagaagatagatattctaccctattcg
gaggatcccaaggcctatataaaaagcgctctttctccggcagaagtcatagatgttatg
atcttagatgcggaaaaaaggctggcacttgcaatagtatcggactctcaactatcatta
gccataggaaagcagggtttaaatgtacgccttgcaaaccggcttgtagactggaacatt
gacgtaaaaaccgaagaacagtttaaacaaatggatatttacacggatgcccgaaaggct
gttgaaaacttattcactgatgacacaggtgatgaagatgaatacgaggagatttccaac
gtttcggaacttcccagcattaccgaagatattctaacggtattgtacaataacgaaata
gaagacatacaagacctaatcaatatggaagatgatgaaatcagaaaattggaaggtctt
acagcagagatggccgatacccttctcgacattatagccaatgccgttgaagttgtagaa
gacgatgaagatgaaactaatgaggaaagcaaacctgttttggagcatgaggacgagact
gaagaattcgaatgtcccgaatgcggtcataaaatcacaattgatatgacaaaatgcccc
aactgcggagtagatcttgcttttgaatatgaggacgaagagtag
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