Treponema putidum: JO40_09365
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Entry
JO40_09365 CDS
T03278
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tpk
Treponema putidum
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpk03016
]
JO40_09365
Enzymes [BR:
tpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
JO40_09365
Transfer RNA biogenesis [BR:
tpk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JO40_09365
Prokaryotic type
JO40_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AIN94284
LinkDB
All DBs
Position
1957733..1958659
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AA seq
308 aa
AA seq
DB search
MNLEAFILGCGGMMPLPYRHLTSVLLRREGDLFLFDCGEGTQVALRRLNLRWKRINAIFI
SHTHADHITGLPGLLMLSSQVDRDEPLYIIGPPKVAEYVETSRKVLDMYINYEIIVKEIK
EPGVVYSTGEFQVRSFWLDHTKPCLGYTFEEFERPGEFNPEAARALNVPCGPLWSKLQGG
NEVTSADGKTVRPEDVMGPKRKGRKFSFVTDTKYLSSIAQEVKHSDFFVCEGMFEKGMEK
DAAEKKHMTCTQAAQIAKDAEVKKMALIHYSPRYTDNELKVLLDHAREVFPETILSKDRM
NIQLEYED
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaagcttttattttaggctgcggcggaatgatgccgcttccatatcgacat
ttaacatcggttttgcttcgccgtgagggcgatttgtttttgtttgattgcggggagggg
actcaggttgccctgcgccgccttaatttgcgctggaaaaggattaatgctatttttata
agccatacccatgccgaccatataaccggtcttccgggtcttctaatgctctcatctcaa
gttgatagggatgaacctctttatataatagggcctcccaaggttgccgaatatgtggag
actagccggaaagttttagatatgtatatcaattatgagattatcgtaaaagaaataaag
gagccgggtgtcgtttattctaccggcgaatttcaggtacgctctttttggctggatcat
acaaaaccctgtctgggatacacatttgaagagtttgaaaggccgggggaatttaatcca
gaagctgcaagagccttaaatgttccatgcggccctctttggtcaaagctccaaggcgga
aatgaagtaacctcagccgacggaaaaacagtccggccagaagatgttatgggccctaaa
agaaagggcagaaaattcagctttgtaaccgatacaaaatatttatcctccattgctcaa
gaggtcaaacattccgacttttttgtttgcgaagggatgtttgaaaagggaatggaaaaa
gatgcagccgaaaaaaaacacatgacatgcactcaggcggctcaaatagctaaagatgct
gaggtaaaaaagatggccctaattcattacagtccgaggtacaccgataatgagcttaaa
gttcttttagatcatgccagagaagttttccccgaaacaatcctttcaaaagacagaatg
aatattcaactggaatatgaagattag
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