Treponema paraluiscuniculi Cuniculi A: TPCCA_0230
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Entry
TPCCA_0230 CDS
T01555
Symbol
priA
Name
(GenBank) DNA replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TPCCA_0230 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpl03400
]
TPCCA_0230 (priA)
Enzymes [BR:
tpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPCCA_0230 (priA)
DNA repair and recombination proteins [BR:
tpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPCCA_0230 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
nSTAND_NTPase5
AAA_16
AAA_19
PIF1
ATPase_2
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEH40183
UniProt:
F7XS60
LinkDB
All DBs
Position
236817..238790
Genome browser
AA seq
657 aa
AA seq
DB search
MAPWLELVFDVPLDKSFTYRACAAHAGEALVGRRVLAPFGARTLIGFVISESHSSPADCG
GAVGTFKEIIRVIDREALFDQTHLACARWMAHFYLCALGQALCAVVPSRKRERTLSSFAS
CAGVRRTDTYALSGEQRKAIDAITASTGARSFYVHGVTGSGKTEVFLRAAEAVLARGKSV
IYLVPEIALTHQVLQEVYVRFGSQAAVLHSALSGSQRLGEWRRIQRMRHCVVIGARSAIF
APLKQLGLVIMDEEHDSSYKSAHVPRYHARQVAMYRCMDANCPFVMGSATPSVEAWYAML
RGAVRRLPLTARVAGGAPPRFEVVDVSKEALLLSTRLVDEIRKTKEAGYQSMLFLNRRGF
SYSFQCRSCGYTLCCTQCAVPLTWHKRVGAMQCHYCGRQEAPPESCPCCHSFDTRYGGVG
TEYIEEAVQALFPEYRIARVDTDALRSGHVQQTMEQFRAGKIDVLLGTQMIAKGFNFPTL
RLVGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVIIQTRNPAHPAVVCAQH
GDCESFYAQELAQREALCFPPFVRLIRFVFRSKTQRKAKDAAYAAHALLTAQMPLGADVL
GPAACVVAQVAGSYRMQILLRAPSFPVVQQVARSFLDEFRAPAGVYVESDVDPVNVL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtggcttgagcttgtttttgacgttccactggataaaagctttacgtaccgt
gcgtgtgctgcccacgcgggtgaggcactcgtgggtagacgagttcttgctccctttggg
gcgcgtacactcattggatttgtgataagtgaatcacattcttcgcctgctgattgcggt
ggtgcagttggcacgttcaaggagatcatccgcgtcattgacagggaagcgctttttgac
caaacgcatcttgcgtgtgcgcgttggatggcgcatttctacctgtgtgccttaggtcag
gcgctgtgtgcggtggttccgtctcggaaacgagaacggacattgtcttcttttgcttct
tgtgcgggtgttcggcgcactgacacctatgcgctttcgggcgaacagcgcaaggcgatt
gatgcgattaccgcgagcaccggtgcgcgcagtttttatgtgcacggggtgacagggtcg
gggaagacggaagtgttcttgcgcgcagccgaggcagtccttgcgcgtggcaagtcggtt
atctatcttgttcctgagatagcgctcactcaccaggtgctccaggaggtgtatgtgcgc
tttggcagtcaggcggcggtgttgcactcagcgctcagtggcagtcagcgcctaggtgag
tggcggcgcatacagcgcatgcgtcactgtgtagtgattggagctcgaagtgcaattttt
gctccgttgaagcagctgggccttgtgataatggatgaagaacatgacagttcgtataag
tctgcgcatgtgccgcgctatcatgcgcgacaggtagcgatgtatcgctgtatggacgcg
aactgtccgtttgtcatggggtctgcaacaccgtctgtggaggcctggtacgcgatgctg
cggggggcggtgcgtcgtttaccattgactgcgcgtgttgcgggaggggctccgccgcgt
tttgaggtggtggacgtgtcaaaagaggccctgttactctctacccgtctggtggatgaa
atacgcaagacgaaggaggcaggatatcaatcgatgctctttttgaatcgtcgaggattt
tcctattcgtttcagtgtcgcagctgtggatacacgctgtgttgcacgcagtgtgcagtt
cccttgacgtggcacaaacgtgtgggggcaatgcaatgtcattactgcggcaggcaagag
gcgccgcctgaaagttgtccgtgctgtcattcatttgatacccgatacggcggggtgggc
acagagtatattgaggaagcggtacaggcgctatttcctgaataccgtattgcacgggtg
gacaccgatgcgctgcgctcagggcacgtgcagcagacgatggagcagtttcgcgcgggg
aaaatcgatgtactgttgggtacgcaaatgatagcaaagggatttaatttccctacgctg
cgtttagtgggtattgcctgcgcagatactggattgcacacgccagactttcgcgccgcc
gagcggagttttgccttgatgatgcaagtggccggacgtgcgggtcgctatgtagataac
ggcctggtcatcatccaaacacgcaatcctgcgcatcctgcggtggtgtgtgcgcagcac
ggggattgtgagtccttttatgcgcaagaacttgcgcagcgggaggcgctgtgttttccg
ccctttgtgcgccttattcggtttgtttttcgcagcaagacgcagcgcaaggctaaagac
gccgcgtatgcggcacatgcgcttttgacggcgcagatgcctctgggtgcggacgtactg
ggacctgcagcgtgtgtggtggcgcaggtggcaggcagctatcggatgcaaatactgctg
cgtgccccgtcattcccagtggtgcagcaggtggcgcgcagctttttagatgaatttcga
gctccggcgggggtgtacgtagaatctgacgtagatcctgtaaatgtgctgtag
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