Treponema paraluiscuniculi Cuniculi A: TPCCA_0627
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Entry
TPCCA_0627 CDS
T01555
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpl03400
]
TPCCA_0627 (sbcC)
DNA repair and recombination proteins [BR:
tpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPCCA_0627 (sbcC)
Archaeal homologous recombinant proteins
TPCCA_0627 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
SbcC_Walker_B
SMC_N
AAA_27
TMP_4
nSTAND3
AAA_21
ABC_tran
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEH40560
UniProt:
F7XT63
LinkDB
All DBs
Position
677033..680176
Genome browser
AA seq
1047 aa
AA seq
DB search
MKPMRLTLHNIGPFVGTHTVDFTALGPIFLVCGKTGSGKTTLFDAIAYALYGKPLGTRAE
VIRSLRSHYAAPSEAAFATLEFSLGTKIYRVHRTLTCTLSHRKTEQPEQLYLEQKKGHGW
ERIACAHKSETECVIHDLLKLNSKEFERVVMLPQGECAQFLKANSKEKKETLMNLFPVDQ
YTALMERAKKKSLHAKAVLETLRSQLETLCAECMPDTYHERKQTLEAELQHARDALQQTR
ISHAYYTQKREALEAQLKKQQLCKELRARIETYRAQEPVHAETQKRIDRARKAAPLAAHI
KHVTQCEQDAQRIHAEIQEKMRSREQLLMKRAAHVAQQSSIEEQRRLLQTLHSACIHIED
AHDVATSIRDIFCQAHTLTQHIHTLAQQKTTLTQQEQSLCKELDILQREAGTIDTRTSAF
NDLQIQLAHAKKTQELSQRYAELCAAHATCTAQCEKLEKIHAQKSAYSTRAREQLLQTKE
QIHLQETRTHAVVLARLLEHQEPCPVCGSCIHPNPARRDIDNLEPLTRRMQRIEQTYAQL
ETSEKDVYHILTSERERRASYSAQMQEIQHSFSILTSCDTRSSCDIPNVQKITVRVLDLT
EKLSRAKDMLACAQHALLRKKQPEQDLQDVRAHLQQCSQELAKKETALHALQETLTQQRV
RIHALSIRLPKELLASNLLAPQKMQHEKESVAYWKEMLAHCQTLMRELHTHIEEYDREFN
EIENASSALGADIAAREDALNHVQKEYMHLARTVCCARTEAHFNNNEEVTAALMTDAELS
HAAAEIQFFNELRAADTHLLKTLEAEIGTEIPSDLDELNAQCHTLVKDEENFLSRIEILS
ATLHTLTHQYLKYEECSKQLAQKTQESAKLITLSDELNGINQKKIQFDAWALISFLHEIT
AYANIRLQKMSEGRYHLRVADSHVNARGYQGLALIVADAYTGSVRPSATLSGGETFMASI
SLALGLADSIQTRSGGIVLDSLFIDEGFGSLDEASLDKAIGILDEIREGSRMIGIISHVH
ELRTRIPHKILIKKTNAGSHVMQGDAE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgatgcgtcttacgctccacaacatcggtcctttcgttggcacccatacagtt
gacttcaccgcgctcggtcctatttttctagtgtgtgggaaaacaggttcaggaaaaacc
actctattcgatgcgatcgcctatgccctgtatgggaaaccccttggaacccgtgcagaa
gttatccgcagtctgcgcagtcattacgccgcaccatcagaagctgcatttgctacgctg
gaattttcactcggcactaaaatctaccgggtacaccggacgctgacttgcacactttcc
cacagaaaaacagagcaacccgagcagctgtatcttgagcaaaaaaaaggtcatggatgg
gagcgtattgcttgtgcgcataaaagtgaaactgaatgtgttattcacgatcttctcaaa
ctcaatagcaaagaatttgagcgcgtggttatgctcccacagggagaatgtgcgcaattt
ttaaaagcaaattcaaaagaaaaaaaagaaacgctgatgaatctatttcctgttgatcaa
tatactgctcttatggagcgagcaaaaaaaaaatcgctccatgccaaagcagtgcttgaa
acgctgcgttcgcaacttgaaactctatgtgcggagtgcatgcccgacacataccacgaa
aggaaacaaacgctagaagctgagttacagcacgcacgtgacgcactgcagcaaacccgc
atctcccatgcgtactatacacaaaaacgtgaagcgctcgaagcacagctaaaaaaacaa
caactttgtaaagagctgcgtgcgcgtatagaaacataccgcgcgcaagaaccagtccac
gcggaaactcaaaagcgtattgatcgcgcgcgaaaagcggcaccacttgctgcgcacata
aaacacgtcacccagtgcgaacaagatgcacagcgcattcatgcagaaatacaggaaaag
atgcgttcacgcgaacaattgctcatgaaacgagctgcgcatgtcgcgcagcagtcatcc
attgaagaacaacgccgtctactacaaacacttcatagtgcgtgcattcacattgaagac
gcgcatgacgttgccacgtcgatacgcgacatattttgtcaggcgcacacactcacgcag
catatccacacgcttgcacaacaaaaaacaacacttacccagcaagaacaatcgttgtgt
aaagaactggatatactgcaaagagaagcgggtactatcgatactcgtacatctgccttt
aatgatttacaaattcaactcgcgcatgcaaagaagacacaagaattgtctcagcgatat
gccgagctctgtgcggctcacgcaacatgcactgcacagtgtgaaaaacttgagaaaata
cacgcacaaaaaagcgcgtatagcacacgggcacgtgagcagctccttcagacaaaagaa
caaattcatctccaagaaacccggacacacgcggtagtactcgcgcgtctcttagagcat
caagaaccgtgtcctgtctgcggctcttgcattcatccgaatcccgcacgtcgagacata
gataatcttgaaccgttaacccggcgcatgcaacgcatagaacaaacatacgcgcagctg
gaaaccagcgagaaagatgtgtaccacatcctcacctctgagcgtgagcgacgtgcatcc
tacagtgcacaaatgcaggaaatacagcattcattttccattcttacatcgtgtgatacg
cgatcatcctgcgatattccaaacgtgcaaaaaattaccgtacgtgttttggatctcacg
gaaaaattatctcgtgcaaaagatatgctcgcatgcgcgcaacacgctttactgagaaaa
aaacagcctgagcaggatttacaggatgtacgcgcacacctgcagcaatgctcacaagag
ctcgcaaaaaaagaaacagcactccacgcattgcaagaaacgcttacacagcagcgcgta
cgcattcacgcactgtccatacgtttacccaaggaattgcttgcatcgaacctacttgct
ccgcaaaagatgcagcatgagaaggagagtgtcgcctattggaaagagatgctcgcacac
tgtcaaacccttatgcgagaattgcacacccatattgaagaatacgaccgagagttcaat
gagatagaaaacgcttctagtgcgcttggcgccgacattgcagcgcgagaagatgcactg
aaccatgttcaaaaagaatacatgcaccttgcacgtaccgtgtgttgcgcacgaacagaa
gcgcatttcaataacaacgaagaagtaaccgccgctcttatgactgatgctgaactttct
catgctgcagcagaaattcaatttttcaatgaattgcgtgcggctgacacccatctactg
aaaacactcgaggcagaaataggaacagaaattccatccgatcttgatgaactgaatgcg
caatgtcatacgttggtaaaagatgaggaaaactttctctctcgtattgaaatactgtct
gccacgctacacacactcacacatcagtatcttaaatacgaagagtgttcaaaacagctt
gcacaaaagacgcaagaaagcgcaaaacttataactctttcagatgaactgaatgggata
aaccaaaaaaaaatacaatttgacgcatgggcactcatttcttttctgcacgaaattact
gcctacgcaaacatacgtttgcaaaaaatgagtgaaggacgttaccatctgagggtagct
gactcgcacgtcaatgcgcgaggatatcaaggacttgcgctgatcgttgcagatgcgtac
accgggagcgtgcgcccttcggcaacactttcaggaggcgaaacctttatggcctctatc
agtcttgcacttggtcttgcagattctatccaaacccgatcgggaggtattgtgcttgac
tcgctgttcatagatgaaggatttggaagtttggatgaggcaagtttagataaggcaatt
ggcatcttagatgaaatcagagagggaagtcgcatgataggcatcatttctcatgttcat
gaattgcgcacgcgcatccctcacaaaattctgataaaaaaaacaaacgcaggatcacac
gtaatgcagggggatgcagaatga
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integrated database retrieval system
