Treponema paraluiscuniculi Cuniculi A: TPCCA_0704
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Entry
TPCCA_0704 CDS
T01555
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03410
Base excision repair
tpl03430
Mismatch repair
tpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPCCA_0704 (recJ)
03430 Mismatch repair
TPCCA_0704 (recJ)
03440 Homologous recombination
TPCCA_0704 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpl03400
]
TPCCA_0704 (recJ)
DNA repair and recombination proteins [BR:
tpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TPCCA_0704 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TPCCA_0704 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TPCCA_0704 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEH40633
UniProt:
F7XTD0
LinkDB
All DBs
Position
complement(763450..765570)
Genome browser
AA seq
706 aa
AA seq
DB search
MKRWRAKALDEGRVRELTARYRCSALEAAILVRRKVVDADALLFHFERDLRYLPGPFRFH
AMSAAVDRLRLAHERKEKVLIFGDRDADGISATTLLFEALCAFGLTVCWRVPVADEPYGL
SCNAVDEHAAAGGTLIVTVDCGISNRAEIAYARHRGIDVLVIDHHAAPETLPDAIIINAK
VPGAGYPHEFLSGCATAWKVVTALRFSTSGWYQRPVVLLHVRPVTGAYTIEAVKMCNMEV
VDRLSETVVPRMLLPSHTRLGAFLEGQEVFVWDEQVVRTQLAKVFGGEFPWRFTDVRPRM
AAFFPQCERASLLRMKNFSRIGRARSKPMEEIESFINLFITFVQKDTQLYRGAADELQLV
AISTLSDLMVLAGENRIMVRYGLQAMNEAPRVGLRELFAIQRLMGKKLGTVEVGWSIVPL
INATGRLGCPHRAVELFLMREASQRALQARKMVQLNEQRKKLGRSARALAEPLARASLET
YSNRLAVVCSDKIHRGVTGILANCLSEALRVPCVIICIMADGHAVGSLRSARGYHLFSLL
DPLADLFSDYGGHAFAAGFSIPSERIPQLLHRMELYAATIEFADESAQECGEFDAELDAT
QMTRGLLTLIDRFEPYGEGNPPLCFLAKKLKIFSASLFGRTERVHVKLTLDAQVHKWPAI
YWGAGEKLAQEFAVGDVVDAVFQVTRNTFQGTCTPQLVIQDLWRSE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtggcgtgcaaaggcacttgacgaagggcgtgtccgcgagcttaccgcgcgg
tataggtgctcggcgcttgaggcggccatccttgtgcgtcgcaaggtagtggatgctgac
gcactcctttttcattttgagcgtgatctacgctatctgccaggaccgttccgtttccat
gcgatgagcgctgcagttgaccgtttgcgtcttgcgcatgagcggaaagaaaaggtgctc
atctttggggatcgtgatgcagacggtattagcgccaccacccttctttttgaggctctc
tgtgcatttggcttgacggtgtgctggcgcgtgccggttgccgatgagccctatgggctc
tcgtgcaatgcagtagatgagcatgcggccgcagggggtactctcattgtgaccgttgac
tgcggtatttctaatcgcgcagaaattgcgtatgcgcgtcacagaggtattgacgtactg
gttattgatcaccatgcggcccctgagacactccctgatgcaattatcattaatgcaaaa
gtgccaggtgcagggtatccgcacgagtttctctcaggctgtgcaactgcgtggaaggtg
gtaacggcgctccgtttcagtaccagcggctggtatcagcggcctgtggtgcttctacac
gttcgtccggtgactggggcgtatacgattgaggctgtaaaaatgtgtaatatggaggtg
gtggaccggctttcggaaacggtggtcccacgtatgctcctgccatctcatacgcgtctt
ggcgccttcctggagggtcaggaagttttcgtatgggatgagcaggtggtgcgcacgcag
ttggccaaagtgtttggtggagagtttccctggcgttttaccgatgtgcggccgcgtatg
gccgcgttttttccccaatgtgaacgcgcaagccttttaaggatgaagaacttttctcgc
atcgggcgtgcgcgctcaaaaccgatggaggaaatcgaaagctttatcaatctttttata
acttttgtgcagaaagatacccagctctaccggggcgcggcggatgaattgcagcttgtg
gcaatttctacgctttctgatcttatggtgttagcgggggagaaccgtattatggtccgc
tacggtctgcaggcgatgaatgaggcgccacgtgtgggtttgcgtgagttgtttgcgata
cagcgtctcatggggaagaagttaggaaccgtagaggtagggtggagtattgtgccgctt
atcaatgcaacggggcggttagggtgtccgcaccgtgcagtggaactgtttttaatgcgc
gaagcttcgcagcgcgcgctgcaggcacgaaaaatggtgcaattgaacgaacagcgaaaa
aaattaggaaggagtgctcgtgcacttgctgagcctcttgcgcgtgcaagtcttgagacg
tacagcaaccgcctggcagtagtttgtagcgataagattcatcggggcgttacggggatt
cttgcaaactgtttgagcgaggcgctgcgcgtgccttgtgtgatcatttgtataatggca
gacgggcacgcggtaggatcgttgcgttcggcgcggggatatcacctattttcgctctta
gatccccttgcggacttgttctctgattatggggggcatgcatttgcggcgggtttttcg
attccctctgagcgaattccccagctattgcaccgtatggaactgtatgcggcaaccatt
gagtttgctgatgaaagcgcgcaagagtgtggagaatttgatgcagaactggatgctacg
cagatgacgcgggggcttttgacccttatcgatcgctttgagccgtacggagaaggcaat
cccccgttgtgctttttggcgaagaaattgaaaattttttctgcatcgctttttgggcgt
acagaacgtgtgcacgtaaaattgaccttggatgcacaggtgcataaatggcccgcaatt
tactggggagcaggggaaaagttggcacaggagtttgcagtgggggatgtagttgacgcg
gtttttcaagtgacgcgtaacacgtttcagggaacgtgcacaccgcagctggtcattcaa
gatttgtggaggagtgagtga
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