Treponema paraluiscuniculi Cuniculi A: TPCCA_0770
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Entry
TPCCA_0770 CDS
T01555
Name
(GenBank) probable ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPCCA_0770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpl03019
]
TPCCA_0770
03009 Ribosome biogenesis [BR:
tpl03009
]
TPCCA_0770
Enzymes [BR:
tpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPCCA_0770
Messenger RNA biogenesis [BR:
tpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TPCCA_0770
Ribosome biogenesis [BR:
tpl03009
]
Prokaryotic type
rRNA helicases
TPCCA_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
Cas3-like_C_2
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AEH40699
UniProt:
F7XTI7
LinkDB
All DBs
Position
830836..832779
Genome browser
AA seq
647 aa
AA seq
DB search
MQGAWLGAHRERAPRALERYGVQRSLCVFVSTRKFHFLLHFPPMGVSFEELGLNEQSLAA
VRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALV
LVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGEIIVGTPGRVIDHI
ERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIAST
FMGSYEVVEEVTPEEARPLIEQFMWVVRDADKIEALVRLIDVSDNFYGLVFCQTKADADT
VAKSLDERHYHVAALHGDIPQSQREKILERFRTKRARILVATDVAARGIDIEGITHVVNY
SIPHDSATYTHRVGRTGRAGSQGIAISFVRPHETRRMEYLSKHCNGELKASTVPLVEHIL
AQKEGRIFSSLKTHLCQLLSEGVHGTFTRFAQRLLQEDLKARVAEAPGTPADVPQEPNVS
LVAALLQIHYGTALDPRQYRDIKTITPETARARPHDVEKAYVRIEYGKKSYPTRKRVVQF
ICALVKIPGHLVDRVDITERCAFARIPRRAAEEAVRLSKKRKDLPRVSFVGHANRLRNTD
TPAEKSTYPRRLPPGEGLREQISRRTSSSKKASGKPENSLPPPRTSP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggggcgtggttgggagcccatagagaaagagctcccagagcgctggaacgctac
ggtgtccagcgctctttgtgtgtttttgtctctacaagaaagttccactttttgctacac
ttccctcctatgggcgtgtcctttgaagagcttggtttgaatgaacaatcgcttgcagcg
gtgcgactcaaggggtttcggtgcccaactcccatccaggctgctgccattccccgactg
ttggcaggggatgcgaatatcatcgcaaaggcccgaaccgggactggaaaaacggccgcc
ttcggcctcccccttatccaagaactgggaagcccgtgcgaacacccaggggccttggtg
cttgttcctacaagggagctcgctgcgcaggtcgcaagcgaactgagctccctgaggata
caaaaaataccccggattcacaccgtgtacggtggagtctccatcgcggagcagctgcgt
aatcttgaacagggtggagagataatagtaggaacgcccgggcgcgtcatcgatcatatt
gagcgcggttctctcgagctgtcttatctgcgctacttcatattagacgaagcggatgag
atgctaaacatgggtttcgttgaggatatagagtctatcttctctcatgcaaataaagac
gcacgcgtccttatgttttctgccactatgcccaggcagatcctttctattgcctctacc
ttcatgggaagctacgaggttgttgaagaagtcactccagaagaggcgcgcccgctcatt
gaacaatttatgtgggttgtaagggacgctgacaaaattgaggcgcttgtgcgccttatt
gatgtgagcgacaacttttacggtctggtgttctgtcaaaccaaggcggacgccgacact
gttgcgaaatctctagacgaacgccattaccatgttgctgcacttcacggagatattccg
caaagccagcgagaaaaaattctcgagcgctttcgtacaaaacgagcgcgtattctcgtc
gccactgatgttgccgctcgcggcattgacatcgaaggaattacgcacgtggtgaactac
tccattcctcatgatagcgctacttacacgcaccgcgtcggcagaactggacgcgcagga
tcacagggtatcgctatcagttttgtacgcccacacgagacacgacggatggagtatctg
agtaaacactgtaatggcgaattgaaagctagtacggtacctttggtggagcacattctt
gctcaaaaggaggggcgtattttctcgtccctcaagactcatctttgccaattactctct
gaaggggtgcacggaacctttacccgttttgcgcagcggctgctccaagaagaccttaaa
gctcgcgtggcagaagccccgggtactcccgctgacgttcctcaggaaccgaacgtgtcg
cttgtcgccgcgctcctgcaaatccactacggtactgcgctggaccccaggcagtaccgg
gatattaaaacgattacgccagagacggcccgcgcacgtccccatgacgtggaaaaggca
tatgtgcgcattgagtacggaaaaaaaagctaccccactcgaaagcgtgttgtgcagttc
atctgtgccctggtaaaaatccccggtcatcttgtagatcgcgttgacataaccgaacgc
tgcgcgtttgcgcgcataccccgacgcgcagcggaggaagcagttcgcttatccaagaag
cgcaaggacctgccgcgcgtttccttcgtcgggcacgccaatcgcctgagaaataccgat
acccctgcagaaaagtctacctatccaaggcgcctccctcccggagaaggcctaagggag
cagatttcaagaagaacctcttcctctaagaaggcttctgggaaaccggagaattctctt
ccccccccaagaacatcgccttga
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