Treponema paraluiscuniculi Cuniculi A: TPCCA_0805
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Entry
TPCCA_0805 CDS
T01555
Symbol
rnb
Name
(GenBank) probable exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpl03016
]
TPCCA_0805 (rnb)
Enzymes [BR:
tpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TPCCA_0805 (rnb)
Transfer RNA biogenesis [BR:
tpl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TPCCA_0805 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEH40731
UniProt:
F7XTL9
LinkDB
All DBs
Position
complement(868514..870616)
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AA seq
700 aa
AA seq
DB search
MELHVGSPVLYRKRPACVHAIERGKDAKITIETEHGLRRVRVKDVLLLHSGTVSSLVELL
SASHIARISEESVQDAREFFGTEAPSFFELAELLWGASAAQSWAYWEQSVQSAYFVCNEP
AAAVRIRSQQECASCAVQEEKKEARQALKQAFIQELRRVARSARNMAPTAQEGMHRVHVS
QVNEQFTPFLQEIEAFALGHANRCKILQCALGCEHREQAHEILLHFGFWPVYRNPYPDRL
CLLFLSPAHVSGSDGERAAQQDVHTHRCVTQARTDCTHLAAYAIDGEGTRDPDDAISFDG
TYFWIHVASPAELVLPDSHADACARTRGASLYLPEGAVRMLSDVVVDTCALARDAVSPAL
SFKILLDEHGDISCVHVLRSMVRVTRLSYAEADSQRDTPALQPLFDFARNNIARRKGRGA
VDICFPDVHMKVDFPVQETGQAGKEMNAGDVPDTQGKVPRVHIEAQQSYESMSMVREFML
LAGEAAARFAFLHNLAFPYVSQERPQLPVQLPAGLAGEYKKRRAMKARRVSTTAAVHAAL
GLSQYSQVTSPLRRYVDLLAHQQLLACIDHAYAKAPAVGSAQTNETLALKLAQADEAARQ
ATQAERVSRRHWTLVYFLMHPHTRYEAIVLEPLQPRAHVWLPAVALEADVALGRQAQFNE
RVMLRVVRVRLATLEVHFSVCEHCHHGVTQAVEGEAEQPS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaactacatgtggggagtccggtgctctatcgaaagcgccctgcgtgtgtacacgct
atcgagcgagggaaggatgcgaagatcaccattgaaaccgaacacgggttaagacgcgtg
cgcgtgaaagacgttttgctcttgcactcgggcactgtttcttccctggtagaactattg
tctgcgtctcacattgcgcgtataagcgaggaatccgtacaggacgcgcgcgagtttttc
ggtaccgaagctccttccttttttgaacttgcagagctcctctggggggcttctgccgcg
cagtcgtgggcctattgggagcaaagtgtgcaaagtgcgtattttgtttgcaatgagcct
gccgccgcagtgcgcatccgctctcagcaagagtgcgcatcatgcgcagtgcaggaagaa
aaaaaggaagcgcgtcaggcgttaaagcaggcgttcatccaggaactacggcgcgtcgca
cggagtgcacgcaatatggcaccaactgcgcaggaaggaatgcatcgtgtgcacgtgtcg
caggtgaacgagcagtttacgccctttctgcaggaaatcgaagcgttcgcgttggggcac
gcgaatcgctgtaagattttgcagtgtgccttaggctgcgagcacagggagcaagcgcat
gaaatactcttgcacttcgggttctggccggtgtatcgcaatccgtatcctgatcgtctg
tgtcttctatttttaagtcctgctcatgtgtctggttctgatggagaacgtgcggcgcag
caagatgtgcacacacataggtgtgtcactcaagcacgcacagattgtacgcatcttgcc
gcgtatgccatcgatggggagggtacgcgcgaccctgacgatgcgatcagtttcgatggt
acgtatttttggatccatgtagcgagccctgcagagctcgttcttcctgattcgcacgca
gatgcatgcgcacgtacacggggtgcttcgctctatttgcctgagggcgcagtgcgcatg
ctcagcgacgtggtggttgatacgtgtgcgcttgcgcgcgacgcagtttctcctgcactg
tcttttaaaattttacttgatgagcacggtgacatcagctgtgtgcacgtgctccggagc
atggtgcgtgttacgcgcctttcctatgcggaggcggattcccagcgcgatacccccgcg
ttgcagcctctttttgactttgcgcgcaacaacattgcacggagaaaagggcgcggcgca
gtggacatttgctttcctgatgtccacatgaaggtagattttcctgtgcaagaaacaggg
caagcgggaaaggaaatgaacgccggggacgtgcccgatacacagggaaaggtgccgcgt
gttcacattgaagcacagcagtcgtacgagtctatgagcatggtgcgtgaattcatgctc
ttagcgggagaagcggcagcacggtttgcctttctacataaccttgcctttccttatgtg
agtcaggaacgtcctcagctgcccgtgcaactaccagcgggattggcgggggagtacaaa
aagcggcgcgcgatgaaagctcgtcgcgtgagcacaaccgccgcggtgcacgcagcactc
ggactgtcccagtacagtcaggtgaccagtcccttgcgtcgctatgtggatttgcttgcg
catcaacaattactggcgtgtattgatcacgcgtatgcaaaagctcctgctgtaggaagt
gcacagacaaacgagacgcttgcgctcaagcttgcgcaggcagatgaggcagcgcgccag
gccacacaagcagagcgtgtatcgcgtcgtcactggacgctcgtatactttttgatgcac
ccacacacgcggtacgaagcgattgtgttagagccactgcaaccgcgtgcacacgtgtgg
ttacctgctgttgctcttgaggcggatgtagcattaggtcggcaggcgcagttcaacgaa
cgcgtaatgctccgtgtcgtgcgtgtgcgccttgccacgttagaagtacatttttctgtc
tgcgagcactgtcaccacggcgtgacgcaggctgtagaaggtgaggcggagcagccctca
taa
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