Treponema paraluiscuniculi Cuniculi A: TPCCA_0889
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Entry
TPCCA_0889 CDS
T01555
Symbol
truB
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpl03016
]
TPCCA_0889 (truB)
Enzymes [BR:
tpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TPCCA_0889 (truB)
Transfer RNA biogenesis [BR:
tpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TPCCA_0889 (truB)
Prokaryotic type
TPCCA_0889 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEH40815
UniProt:
F7XQY0
LinkDB
All DBs
Position
complement(961205..962305)
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AA seq
366 aa
AA seq
DB search
MCRLSMPDAIVPFAKVSGLTSFAALAQVRRLLGVKKVGHTGTLDRFADGLLLLLVGGFTK
LAPVMTRLEKSYEARIQFGVQTDTLDPEGAVVRCSLFPTFARVRAALPHFTGSIDQVPPE
YSALKFGGVRASDRVRRGEAVCMKARRVFVFDLQVLGCEADLGEFQKTQAGRGAAIADLD
LTRVRAVTLYVRCSAGFYVRALARDIAAACGSCAYVSHLRRTRIGPFDLAQAAGVSRLGS
WTWGKERASCGAACFDVGAPPPPSSGGVATDSVSVGCEDLTVREIKQAVVSCDVDFANRI
GLTACSVHAQYASRFLHGERIRACWFQSFGTRRSGERALVFSEGRCLGLIRKAANGFSYD
TVFCTE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcagactgagcatgcctgacgctattgttcctttcgcaaaggtttccggtcttacg
agttttgcggcactggcacaggtcaggcgtcttctgggagtaaaaaaggtagggcatacg
gggacgcttgatcgctttgctgatgggttgctgttgcttttggtagggggctttaccaaa
ctcgcgccggtgatgactcgcttggaaaagagttacgaggctcgcatccagtttggggta
caaacagacactctagatccggagggggctgtcgtgcggtgctccttgttcccaacattt
gcgcgcgtacgtgcggcgctgcctcacttcactgggagtattgatcaggtgccgcctgaa
tattcggcgctaaaattcggaggtgtgcgtgcgtccgaccgggtgcggcgtggggaagca
gtgtgcatgaaggctcggcgtgtgttcgtctttgacttgcaggtactaggttgcgaggcg
gatctgggtgaattccaaaagacgcaggcggggaggggggctgcgattgctgatcttgat
ctgacgcgcgtgcgtgctgtaacgctgtacgtacgttgttcggcaggcttctacgtgcgt
gcacttgcgcgcgacatagcagccgcttgcggctcttgcgcgtatgtttcacatttacgg
agaacacgcattggaccctttgatcttgcacaggcggcgggtgtgtctcgtctcgggtcc
tggacatggggcaaagagcgtgcgtcttgcggtgccgcttgctttgatgtgggtgctcca
ccgcctccgtcctcaggcggcgtggcaaccgattcagtctctgttgggtgtgaagacttg
acggtgcgtgagattaaacaggcagtggttagctgtgatgtggactttgcgaatcgtatt
ggacttacggcgtgttcagtgcatgcgcagtatgcgtcgcggtttttgcatggggaaaga
atacgcgcatgttggttccagtcgtttggtacgcgaaggtccggggaacgtgcgttggtg
ttttccgagggtcgctgtcttggattaataaggaaagcggcgaatgggttttcgtatgat
acggtattttgtacggagtga
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