Treponema paraluiscuniculi Cuniculi A: TPCCA_1018
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Entry
TPCCA_1018 CDS
T01555
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tpl
Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPCCA_1018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpl03019
]
TPCCA_1018
Messenger RNA biogenesis [BR:
tpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TPCCA_1018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
KH-I_KHDC4-BBP
UPF0767
Motif
Other DBs
NCBI-ProteinID:
AEH40943
UniProt:
F7XR91
LinkDB
All DBs
Position
1105248..1106762
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AA seq
504 aa
AA seq
DB search
MTTSIVIGVVLVTVGLTFGWTIRWLYARFHLSACEQRAERILQEAQKEAESKKKSILLEA
KEYVLRERNQQERDDRDRRAELQRAERRLLQKEEALSTRAGELDSRERSLKQRDQSLCQE
EARYRQELERVSGLTQNQARDLIIKNLENEAKHDAQALINKIEEDAALNAERRARDILVT
TMQRITADVTGDVTVSTVNLPSEEMKGRIIGREGRNIRALETLTGADVVVDDTPEAVVIS
CFDPVRKEIARISLERLVLDGRIHPARIEEIVQKVTQEVSQKIYEEGEKVLFDLGIHDMC
PEGVRALGRLYFRTSYGQNVLYHSKEVALLASILASEIGADVAIAKRGALLHDIGKGVET
DSDRNHAEIGMEMARKMNEDPRVVNAVGSHHNDIEPCCVESWLVQVADAISAARPGARRE
MVDHYVKRLENLEAIAEGFSGVEKAYAIQAGRELRVLVNNDKIPDRDVKALGRDIAKKIE
SDLKYPGRIRVTLIRETRVVEYAR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtctattgtgatcggtgttgtccttgttactgtcggtttaaccttcggatgg
accattcgctggctctacgccagatttcacttatccgcctgtgagcaacgtgcagaacgt
atcctccaggaggcacaaaaagaagctgaatccaaaaagaaaagcattctccttgaggca
aaagaatatgtccttcgcgaaagaaatcaacaggaacgagacgacagagaccgaagagct
gagctgcagcgtgcagagcgacgccttcttcaaaaagaggaagccctctctacgcgcgcg
ggggagcttgattctcgagaacgatcgctaaaacagcgggatcagtccctctgtcaagaa
gaggcccgctatcgccaggagctcgagcgtgtctctggcctcactcagaatcaggcacgg
gatctcatcatcaaaaaccttgagaacgaggcgaagcacgacgcacaggcgctcatcaac
aagatagaggaggacgcggctttgaacgctgagcgtcgcgcgcgcgacatcctcgttact
accatgcagcgtattactgctgatgtcaccggtgatgtgaccgtctctacggtgaatcta
cccagtgaagaaatgaagggacgcatcattgggcgcgagggacgtaatatccgcgcgtta
gagacactcactggtgctgacgttgtcgtagatgacacacctgaagctgtcgtcatttcc
tgtttcgacccggtacgcaaagagattgcgcgcatctctcttgagcgtcttgtacttgac
ggtcgaatccatccggcgcgcattgaggaaattgtgcagaaggtgacgcaggaagtttct
caaaaaatctatgaggaaggggagaaagtgctgtttgacctcggtattcacgatatgtgt
cccgagggggtacgggcactggggcgcctgtatttccgtacaagctacggacagaatgta
ctctaccactcaaaggaggtggctctgctcgcttccatactcgcctcggaaatcggcgca
gatgtggccattgccaaaaggggcgcgttgctgcacgacattggcaagggagtggaaact
gattcagaccgcaaccacgcagaaattggtatggagatggctcgcaaaatgaatgaggac
ccgcgagtggtgaacgccgttggttctcaccacaacgacatagagccgtgttgtgttgag
tcttggctcgttcaggtagctgatgctatctctgctgcgcgtcctggtgctcggcgtgaa
atggtggatcactacgtcaagcgtctagaaaacctcgaggcgattgctgaggggttctcg
ggtgtggagaaagcctacgctattcaggccgggcgcgagttgcgtgttttagtgaacaac
gataaaatccccgacagggacgtgaaggcacttggacgtgacatcgcaaagaaaatagag
agcgacttgaagtatcctgggcgtatccgggtcactcttattcgagaaacgcgcgtcgtg
gagtacgcccgctga
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