KEGG   Treponema paraluiscuniculi Cuniculi A: TPCCA_1018
Entry
TPCCA_1018        CDS       T01555                                 
Name
(GenBank) conserved hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
tpl  Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPCCA_1018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpl03019]
    TPCCA_1018
Messenger RNA biogenesis [BR:tpl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TPCCA_1018
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B HDOD KH_2 KH-I_KHDC4-BBP UPF0767
Other DBs
NCBI-ProteinID: AEH40943
UniProt: F7XR91
LinkDB
Position
1105248..1106762
AA seq 504 aa
MTTSIVIGVVLVTVGLTFGWTIRWLYARFHLSACEQRAERILQEAQKEAESKKKSILLEA
KEYVLRERNQQERDDRDRRAELQRAERRLLQKEEALSTRAGELDSRERSLKQRDQSLCQE
EARYRQELERVSGLTQNQARDLIIKNLENEAKHDAQALINKIEEDAALNAERRARDILVT
TMQRITADVTGDVTVSTVNLPSEEMKGRIIGREGRNIRALETLTGADVVVDDTPEAVVIS
CFDPVRKEIARISLERLVLDGRIHPARIEEIVQKVTQEVSQKIYEEGEKVLFDLGIHDMC
PEGVRALGRLYFRTSYGQNVLYHSKEVALLASILASEIGADVAIAKRGALLHDIGKGVET
DSDRNHAEIGMEMARKMNEDPRVVNAVGSHHNDIEPCCVESWLVQVADAISAARPGARRE
MVDHYVKRLENLEAIAEGFSGVEKAYAIQAGRELRVLVNNDKIPDRDVKALGRDIAKKIE
SDLKYPGRIRVTLIRETRVVEYAR
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgaccacgtctattgtgatcggtgttgtccttgttactgtcggtttaaccttcggatgg
accattcgctggctctacgccagatttcacttatccgcctgtgagcaacgtgcagaacgt
atcctccaggaggcacaaaaagaagctgaatccaaaaagaaaagcattctccttgaggca
aaagaatatgtccttcgcgaaagaaatcaacaggaacgagacgacagagaccgaagagct
gagctgcagcgtgcagagcgacgccttcttcaaaaagaggaagccctctctacgcgcgcg
ggggagcttgattctcgagaacgatcgctaaaacagcgggatcagtccctctgtcaagaa
gaggcccgctatcgccaggagctcgagcgtgtctctggcctcactcagaatcaggcacgg
gatctcatcatcaaaaaccttgagaacgaggcgaagcacgacgcacaggcgctcatcaac
aagatagaggaggacgcggctttgaacgctgagcgtcgcgcgcgcgacatcctcgttact
accatgcagcgtattactgctgatgtcaccggtgatgtgaccgtctctacggtgaatcta
cccagtgaagaaatgaagggacgcatcattgggcgcgagggacgtaatatccgcgcgtta
gagacactcactggtgctgacgttgtcgtagatgacacacctgaagctgtcgtcatttcc
tgtttcgacccggtacgcaaagagattgcgcgcatctctcttgagcgtcttgtacttgac
ggtcgaatccatccggcgcgcattgaggaaattgtgcagaaggtgacgcaggaagtttct
caaaaaatctatgaggaaggggagaaagtgctgtttgacctcggtattcacgatatgtgt
cccgagggggtacgggcactggggcgcctgtatttccgtacaagctacggacagaatgta
ctctaccactcaaaggaggtggctctgctcgcttccatactcgcctcggaaatcggcgca
gatgtggccattgccaaaaggggcgcgttgctgcacgacattggcaagggagtggaaact
gattcagaccgcaaccacgcagaaattggtatggagatggctcgcaaaatgaatgaggac
ccgcgagtggtgaacgccgttggttctcaccacaacgacatagagccgtgttgtgttgag
tcttggctcgttcaggtagctgatgctatctctgctgcgcgtcctggtgctcggcgtgaa
atggtggatcactacgtcaagcgtctagaaaacctcgaggcgattgctgaggggttctcg
ggtgtggagaaagcctacgctattcaggccgggcgcgagttgcgtgttttagtgaacaac
gataaaatccccgacagggacgtgaaggcacttggacgtgacatcgcaaagaaaatagag
agcgacttgaagtatcctgggcgtatccgggtcactcttattcgagaaacgcgcgtcgtg
gagtacgcccgctga

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