Tautonia plasticadhaerens: ElP_09400
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Entry
ElP_09400 CDS
T09913
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
tpla
Tautonia plasticadhaerens
Pathway
tpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ElP_09400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpla03021
]
ElP_09400
03019 Messenger RNA biogenesis [BR:
tpla03019
]
ElP_09400
Transcription machinery [BR:
tpla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ElP_09400
Messenger RNA biogenesis [BR:
tpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ElP_09400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA
S1CSD-TOTE-2
AAA_25
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QDV33098
UniProt:
A0A518GWY1
LinkDB
All DBs
Position
complement(1217024..1218862)
Genome browser
AA seq
612 aa
AA seq
DB search
MANDTRRREQSTSPSPRSRKSSQAEPAAPSPIDAEPLGPEAAEPNASSPAPARREPARDP
VRYRETYRERDRDGNSAPPPSLRERLRRGQDARASDRPRTEAEVDGDDAGRTFGQGLDVE
DSHDLDELVPRTNSRDRGQDGDGAQDQDDADLAAFAHAGERDDADDDFPDEEPDAFPGDV
EVNERYEDIKRGEIHLTELQKMTMPQLISTAKREGVAEYTGLKKQDLIFKILKERVKQNG
LMYGEGTLEVLPDGFGFLRSPDYNYLPCPDDIYVSPSQIRRFGLKTGAIVAGQIRPPKEN
ERYFALLRVEAINYEDPDILSEKVSFDDLTPLHPLSRIKLETTADEVNMRVVDLVSPIGF
GQRGLIVAPPRTGKTILLQKVANSVLVNHPEAYLMVLLIDERPEEVTEMERSVHGVTAEV
ISSTFDEPASRHIQVAEMVIEKAKRMVEYGKDVVILLDSITRLARAYNTEAPHSGKILTG
GIDAGALQKPKRFFGAARKIEEGGSLTILATALVDTGSRMDEVIFEEFKGTGNMELHLDR
RLVDRRIWPAIDVNRSGTRREENLMPGDELHRVWLLRRVLNDMNPVEAMELLVGRMKKSK
TNVDFLNTMNLT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgacacacgtcgccgggagcaaagcacgtccccctccccccgctcccgcaag
tcgtcgcaggccgagccggccgccccctccccgatcgacgccgagccgctcggccccgag
gccgccgagcccaacgcctcgtcgccggcccccgcccgacgcgagccggcccgcgacccg
gtccgctatcgcgagacctaccgggagcgggaccgcgacggcaactcggccccccccccg
tcgctccgggagcgcctccgacgcggccaggacgcccgggcctccgatcgcccccgcacc
gaggccgaggtcgacggcgacgacgccggccggaccttcggccaggggctcgacgtggag
gattcgcacgacctcgacgagctcgtcccccgcaccaactcccgggaccggggacaggac
ggggacggggcccaggaccaggatgacgccgacctcgccgccttcgcccacgccggggaa
cgggacgacgccgacgacgacttccccgacgaggagcccgacgccttccccggcgacgtc
gaagtcaatgagcgctacgaggacatcaagcgcggcgagatccacctgaccgagctgcag
aagatgaccatgccgcagctcatcagcaccgccaagcgcgagggcgtcgccgagtacacc
ggcctgaagaagcaggacctgatcttcaagatcctcaaggagcgggtcaagcagaacggc
ctgatgtacggcgagggcaccctggaggtcctccccgacggcttcggcttcctccggagc
cccgactacaactacctcccctgccccgacgacatctacgtcagcccgagccagatccgc
cgcttcggcctgaagaccggcgccatcgtcgccggccagatccggccgccgaaggagaac
gagcgctacttcgccctgctccgcgtcgaggcgatcaactacgaggatcccgacatcctc
tccgagaaggtctccttcgacgacctgaccccgctgcacccgctctcccggatcaagctg
gagacgaccgccgacgaggtgaacatgagggtggtcgacctcgtcagcccgatcggcttc
ggccagcgagggctgatcgtcgcccccccccggacgggcaagacgatcctgctccagaag
gtcgccaacagcgtcctggtgaaccaccccgaggcctacctgatggtcctgctcatcgac
gagcggcccgaggaggtcacggagatggagcgatccgtccacggcgtgacggccgaggtc
atcagctccaccttcgacgagccggcctcccggcacatccaggtggccgagatggtcatc
gagaaggccaagcggatggtcgagtacggcaaggacgtggtcatcctgctcgactcgatc
acccgcctggcccgggcctacaacaccgaggccccgcactcgggcaagatcctcaccggc
ggcatcgacgccggggccctccagaagcccaagcggttcttcggcgccgcccggaagatc
gaggaggggggcagcctgacgatcctggccaccgccctggtcgacaccggcagccggatg
gacgaggtgatcttcgaggagttcaagggcaccggcaacatggagctgcacctcgaccgc
cgcctggtcgaccgccgcatctggccggccatcgacgtgaaccgctccggcacccgacgc
gaggagaacctcatgccgggcgacgagctgcaccgcgtctggctgctccgccgggtgctc
aacgacatgaacccggtcgaggccatggagctgctcgtcggccgcatgaagaagtcgaag
accaacgtcgacttcctcaacaccatgaacctcacctga
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