Tautonia plasticadhaerens: ElP_10770
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Entry
ElP_10770 CDS
T09913
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpla
Tautonia plasticadhaerens
Pathway
tpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ElP_10770 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpla03019
]
ElP_10770 (recQ_2)
03400 DNA repair and recombination proteins [BR:
tpla03400
]
ElP_10770 (recQ_2)
Enzymes [BR:
tpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ElP_10770 (recQ_2)
Messenger RNA biogenesis [BR:
tpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ElP_10770 (recQ_2)
DNA repair and recombination proteins [BR:
tpla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ElP_10770 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QDV33235
UniProt:
A0A518GXC4
LinkDB
All DBs
Position
complement(1385556..1388468)
Genome browser
AA seq
970 aa
AA seq
DB search
MSVSEHTSDPERILHERFGLERFRPGQREVIDAVLGGRDVLCVMPTGGGKSLCYQLPALL
MEGLTLVVSPLIALMKDQVDSLQARGLSATLINSTLGPDEQRVRLMEAEAGRYDLLYVAP
ERFRSHRFVETMARLRPALFAVDEAHCISEWGHDFRPDYARLGLARRKLGMPPCIALTAT
ATDLVRRDIAAQLDLREPAQFITGFDRPNLSYAVIDTRRDADKCEELARLLRRTSGSIVV
YTSSRKRCETIAEFIRQDVRRSVVSYHAGLERAQRHSAQEAFMGGDVDVIVATNAFGMGV
DKPDIRAVVHFNIPGTLEAYYQEAGRAGRDGQPADCLLLYAPGDRKLQQLFIESEYPPRE
VVFQVYEHLRRIDADPIELTQSEIKEAVGLDLSESAVGSALKILEGAGALERFSPRENMA
IIRIDREPDEPPLADRVGSQAHVQRLVILGLESLCDRRLGEPVYFHPDEFASGMGIDRMA
FTRAIKHLSAELPITYVPPFRGNALRVLDRDRRSNELEVDFSALEARKEAEYEKLDRMIR
YAEARRCRRAMILGYFGDPLAGNCGRCDRCTGGEAEAESERCPIDTPASREVVLKILSGV
ARTRGRFGKNVVAQMLTGSASEKMGRFRLDRLSTFGVLSEFKQQEIALLIDALTEIGLIR
VDEVDRFKPVVTLSDSGWSYLRARGESGDGVILPGLPQELAFKVRHGGLPRVSRKSPSTG
TVPPPGPEQVGRGVARLPAPSSPENPPGVEIDEGLKTDPLWERLRVLRRTWAQASNVPAY
CVFHDSMLKTLVEERPRTPQELAAIKGFGKAKLERYGTALLEAIASAAHPDPTPPMPYQA
DQSASTNPVGFAVEPSDLFAGSAEDISAIPHEEWTCRLLDRGFSAAEAAAIRGLELDEII
RHAAMQARQGRSVPIDAFLGGEHLDRWEGWLSDRGPDEPPPEVDGTPDLWTLFLRGRSTS
DAVPDPPIAS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtcggagcacacgtccgatccggaacgaattctgcacgagcgattcggcctg
gagcggttccgccccggccagcgcgaggtgatcgacgcggtcctcggcggccgggacgtg
ctctgcgtgatgcccaccggcggcggcaagagcctctgctatcagctcccggcgttgctg
atggagggcctgacgctggtcgtcagcccgctgatcgcgctgatgaaggaccaggtcgac
tcccttcaggcccggggcctcagcgcgaccctgattaatagcaccctgggccccgacgag
cagcgtgtccggctgatggaggccgaggccgggcgttacgacctcctctacgtcgcccct
gagcgattccggagccaccgattcgtcgagacgatggcccggctccgaccggccctgttc
gcggtcgacgaagcccactgcatcagcgagtggggtcacgacttccgccccgattatgcc
cgcctcggccttgcccgccgcaagctggggatgcccccctgcatcgcgctgaccgccacg
gcgaccgacctcgtccgccgggacatcgccgcgcagctcgacctgagagagccggcccag
ttcatcaccggattcgaccggccaaacctctcctatgccgtcatcgacacccggcgggac
gccgacaagtgcgaggagctcgcccggctcctgaggaggaccagcggctcgatcgtggtt
tacacctccagccggaagcgatgcgagacgatcgccgagttcatccgtcaggatgtccgg
cgatcggtcgtctcctaccacgccggcctcgaacgagcgcagcggcactccgcgcaagag
gcgttcatgggcggagacgtcgacgtgatcgtcgccacgaatgccttcgggatgggggtg
gacaagccggacatccgagcggtcgtccatttcaacatcccgggcacgttggaagcctac
taccaggaggccggtcgagccggcagggacggccagcccgccgactgcctgctgctctac
gcgccgggagaccgcaagctccagcaattgttcatcgaaagcgagtatccgccccgtgag
gtcgtcttccaggtctacgagcatttgcgaaggatcgacgccgacccgatcgagctcacc
caatcggagatcaaggaggcggtcggcctcgatctgagcgagtcggccgtcggctccgcc
ttgaagatcctcgagggggccggggcccttgagcggttcagccccagggagaatatggcg
atcatccggatcgaccgggagcccgacgagcccccactggccgatcgggtcgggtctcag
gcccacgtgcaacggctggtgattctcgggttggagagcctctgcgaccgtcgactgggc
gagccggtctacttccatcctgatgagttcgcctcgggcatgggcatcgatcgcatggcc
ttcacccgggcgatcaagcacctctctgctgaattgcccatcacctacgtcccccccttc
cgaggcaacgcactccgggttctcgatcgcgaccgccgatccaacgaactggaggtcgac
ttctccgcgctggaagctcgcaaggaggcggagtacgagaagctcgatcggatgatccgc
tacgccgaggcccgacgctgccgacgcgccatgatcctcggctacttcggagacccactc
gcgggcaattgcgggagatgcgaccgatgcacggggggagaagcggaggccgaatccgag
cgttgcccgatcgacacgccggcgagccgcgaggtggtcctcaagattctctcgggagtc
gcccggaccaggggccgcttcgggaagaatgtcgtcgcccagatgttgaccggatccgcg
tccgagaagatgggacgcttcaggttggaccgcctgagcaccttcggcgtcctctcggag
ttcaagcagcaggagattgccctgctgatcgacgcgctgaccgaaatcggcctgattcgc
gtggacgaggtcgatcggttcaaacctgttgtcacgctgagcgattcgggttggtcctac
ctccgggcgcgaggtgagtccggagacggcgtcatcctgccggggctcccgcaggaactc
gcgttcaaggtccgtcacggcggcctcccccgggtctcccggaaatccccgtcgacgggg
acggttcctccacccggccctgagcaggtgggtcgcggggtggcgcgcctgcctgcccct
tcttcacccgagaatccccctggggtcgaaatagacgagggcttgaagaccgacccgctc
tgggaacgactccgggtgctcaggaggacctgggcgcaggcttcgaacgtcccggcttac
tgcgtcttccacgattcgatgttgaagaccctcgtagaagaacggcctcgaacgccccag
gaattggcggcgatcaagggtttcggcaaagcgaaactcgagcgttacggtaccgcgctc
ctggaggccatcgcctcggcggctcacccggatccgacgcctcccatgccctatcaggcc
gatcaatcggcctcgaccaaccccgtcggatttgccgtcgagccgtcggatctcttcgca
ggctcggccgaggacatctccgcaatcccccatgaggaatggacctgccgtttgttggac
cgcggcttcagcgcggccgaggcggcggcgatccgtggcctggaactcgacgagatcatc
cggcacgccgcgatgcaggcgagacagggtcggagcgtcccgatcgatgcgttcctcggg
ggcgagcatctcgatcggtgggaaggctggctctccgatcgaggccccgacgaaccacct
cccgaggtggacggaactccggatctctggacgctcttcctccgcggtcgatcaacgtcc
gatgccgtacccgaccctccaatcgcgtcctga
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