Tautonia plasticadhaerens: ElP_12790
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Entry
ElP_12790 CDS
T09913
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpla
Tautonia plasticadhaerens
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpla03032
]
ElP_12790
03400 DNA repair and recombination proteins [BR:
tpla03400
]
ElP_12790
Enzymes [BR:
tpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ElP_12790
DNA replication proteins [BR:
tpla03032
]
Prokaryotic type
DNA Topoisomerases
ElP_12790
DNA repair and recombination proteins [BR:
tpla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ElP_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QDV33408
UniProt:
A0A518GXT5
LinkDB
All DBs
Position
1603311..1604429
Genome browser
AA seq
372 aa
AA seq
DB search
MPAAVVQSRSPVRAESAESAESAGLRHASDDGPGIRRVRCGLGFRYEDPAGRTIRDREVM
RRIASLAIPPAWTGVWICPDPSGHLQATGRDARGRKQYRYHPRWRSVRDETKYARMIAFG
ASLGRLRTRIDRDLRRRGLPREKVLAVVVRLLEVSLIRVGNDDYAERNHSYGLTTLRDRH
VSFEGGTIRFAFRGKSGVSHEVDLHDARLARVIRRCRDLPGQELFQYLDQGGKVVDVGSA
DVNDYLREATGRDFTAKDFRTWAGTVLAAMALQECESCSSESEAKRNIVRAVGRVAERLG
NTPTVCRKCYVHPAVIDAYLDGTMLDALRRRADRALSDDLKHLRPEEAAVLALLRSRLSR
EQSGRKTRRRTA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagccgtcgtccagtcccgatctcccgtccgtgccgaatcggccgaatcggcc
gaatcggcggggctccggcacgcctcggacgacgggccggggatccgccgggtccggtgc
ggcttggggttccgctacgaggacccggccggtcggacgatccgggaccgcgaggtgatg
cgacggatcgcctcgctcgccatcccgccggcctggacgggcgtctggatctgccccgat
ccctcggggcacctccaggcgaccggccgggacgccaggggtcgcaagcagtatcgctac
cacccgagatggcggtcggtccgggacgagacgaagtacgcccggatgatcgcgttcggc
gcgtcgctcggccgtctccgtacgcggatcgatcgcgacctgcggcgtcggggattaccc
cgggagaaggtcctcgcggtcgtcgtccggctgctggaggtcagcctgatccgggtgggc
aacgacgactacgccgagcggaaccactcgtacggcctgaccacgctccgggatcgccac
gtctcgttcgagggtggcacgatccgattcgccttccgggggaagtccggggtgtcccac
gaggtcgacctgcacgacgcccgactcgcccgggtcatccgacgctgtcgggatctaccg
gggcaggagctattccagtacctcgaccagggcggcaaggtggtcgacgtcggctcggcc
gacgtgaacgactacctccgggaggcgaccggacgcgacttcacggccaaggatttccgg
acctgggcgggcaccgtcctggcggcgatggccctgcaggagtgcgagtcgtgcagctcc
gagtcggaggcgaagcgtaacatcgtccgcgcagtcgggcgggtcgcggagcgattgggg
aacacgccgacggtctgccgcaaatgttacgtgcatcccgccgtgatcgacgcctacctc
gacggcacgatgctcgacgcccttcgtcgccgggccgaccgggccctgtccgacgacctg
aagcacctccggcccgaggaggcggccgtgctcgccctgctccgatcgagattgtcccgg
gagcaatccggccggaagacccgacgcaggacggcgtga
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