Tautonia plasticadhaerens: ElP_13900
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Entry
ElP_13900 CDS
T09913
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tpla
Tautonia plasticadhaerens
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpla03019
]
ElP_13900 (yhaM_1)
Messenger RNA biogenesis [BR:
tpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ElP_13900 (yhaM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QDV33517
UniProt:
A0A518GY47
LinkDB
All DBs
Position
1720052..1721056
Genome browser
AA seq
334 aa
AA seq
DB search
MTRQYVKQLANGEAVDEVFLVAEKQLRSNRQGQLYLQLDLRDRSGLIGARLWNASEDQAR
LFDAGDYLKVKGKVQIFQGAAQLILSQIDPTPAEGIDPGEFLPQASRGVSEMTARLRQLL
MGVSDPHLRALAECYLIDDDFLRRFTTAPAGVRVHHAYQGGLLEHVLTLMEMADRIAGLY
QGLDRDLLLLGIFLHDSGKVYELDYDRAFGYTDEGQLVGHIVIGVELLSEKVRRTVDLTG
EAFPVERLMRLKHMIVSHHGPPAFGSPKPPMTPEAIALHYLDNLDAKVHAFSRQIRDDPT
IGSAWTSYDANLGHRLYKGAPTAEEGSEPGEWSA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccaatatgtgaagcagcttgccaacggcgaggcggtcgatgaggtcttcctc
gtcgccgagaagcagctccggtccaaccgccaggggcagctctacctccaactcgacctg
agggaccgatccggcctgatcggggcccggctctggaacgcgtccgaggatcaggcccgg
ttgttcgacgcgggagattatttgaaggtcaaggggaaggtccagatcttccagggggcc
gcccagctgatcctctcccagatcgacccgacccctgccgaggggatcgacccgggcgag
ttcctgccgcaggcgtcccggggcgtctccgagatgaccgcccggctccggcaactcctg
atgggggtctcggatccccacctccgcgccctcgccgagtgctacctgatcgacgacgac
ttcctccggcgattcaccaccgccccggcgggggtcagggtgcaccacgcctaccagggc
gggctgctcgagcacgtcctgacgctgatggagatggccgaccgaatcgccgggctctac
caggggctcgaccgggacctcctgctgctcggcatcttcctgcacgactcgggcaaggtg
tatgagctggactacgaccgcgccttcggctacaccgacgaggggcagctcgtcgggcac
atcgtgatcggggtggagctgctcagcgagaaggtcaggcggacggtcgacctgacgggt
gaggcgttcccggtcgagcggttgatgcgcctgaagcacatgatcgtcagccatcacggg
cccccggctttcggcagcccaaagccgccgatgacccccgaggcgatcgcgctgcactac
ctggacaacctcgacgccaaggtgcacgccttctcccgacagatccgggatgacccgacg
atcggctcggcctggacctcctatgacgcgaacctcggccaccgcctctacaagggcgcc
ccgacggccgaggaaggctccgagcccggcgaatggtctgcctga
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