Tautonia plasticadhaerens: ElP_23780
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Entry
ElP_23780 CDS
T09913
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tpla
Tautonia plasticadhaerens
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpla03019
]
ElP_23780 (yhaM_2)
Messenger RNA biogenesis [BR:
tpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ElP_23780 (yhaM_2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QDV34489
UniProt:
A0A518H0W2
LinkDB
All DBs
Position
complement(2974935..2975984)
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AA seq
349 aa
AA seq
DB search
MASGTETTLIRLGEFQDGQEAECFAVLATREKGTTKKNEPFVKCYFRDRHLTVEAPLWAD
SRFLRQADGWTEGLAYRLRARGRFNARYGLQLELIDLRPAGGPDDEADGFDIGTLVERSK
YPQGDRLGKILEFVGRYIEDEKLSELVRRILEAHAPALELMPAASHMHHNVTGGLVEHLW
SVTRVSILLAEHYGRYYEELNPPLNRDVIVAAAILHDIGKLRELEYHPIEAKYTTEGNLI
GHILMGRDLVRDTAREIGDFPVETLLLLEHAILAHHGKTEFGSPKPPATLEAMILHYADE
LDAKFNAVAKVLRTADGEEPFTSKIWAVENRRFYRGTPLPLPDQDQPPF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggcaccgagaccaccctgatccggctcggcgaattccaggacggccaggag
gccgagtgcttcgccgtgctcgcgacccgcgagaagggtacgacgaagaagaacgagccg
ttcgtgaagtgctatttccgggaccggcacctgacggtcgaggcccccctctgggccgac
agccggttcctcaggcaggccgacggctggaccgaggggctggcctaccggctccgggcc
cggggccggttcaacgcccggtacggcctgcaactggagctgatcgacctccgccccgcc
ggcggccccgacgacgaggccgacggcttcgacatcggcacgctcgtcgagcggtcgaag
tacccccagggggaccgcctggggaagatcctggaattcgtcggccgctacatcgaggac
gagaagctctcggagctggtccggcggatcctggaggcgcacgccccggccctggagctg
atgccggccgcctcccacatgcaccacaacgtcaccggggggttggtcgagcacctctgg
agcgtcacccgggtcagcatcctgctggccgagcattacggccgctattacgaggagctg
aacccgccgctgaaccgggacgtgatcgtcgccgccgcgatcctgcacgacatcggcaag
ctccgggagctggagtaccacccgatcgaggcgaagtacaccaccgaggggaacctgatc
ggccacatcctcatgggccgggacctcgtccgcgacaccgcccgggagatcggcgacttc
ccggtcgagacgctcctgctgctggagcacgccatcctcgcccaccacggcaagaccgag
ttcggctcccccaagcccccggccacgctggaggcgatgatcctgcactacgccgacgag
ctggacgccaagttcaacgccgtcgccaaggtgctccgcaccgccgacggcgaggagccg
ttcacctccaagatctgggccgtcgagaaccggaggttctaccggggcacccccctgccg
ctgcccgaccaggaccagccgccgttctga
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