Tautonia plasticadhaerens: ElP_60040
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Entry
ElP_60040 CDS
T09913
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tpla
Tautonia plasticadhaerens
Pathway
tpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ElP_60040 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpla03019
]
ElP_60040 (cshA)
03009 Ribosome biogenesis [BR:
tpla03009
]
ElP_60040 (cshA)
Enzymes [BR:
tpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ElP_60040 (cshA)
Messenger RNA biogenesis [BR:
tpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ElP_60040 (cshA)
Ribosome biogenesis [BR:
tpla03009
]
Prokaryotic type
rRNA helicases
ElP_60040 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Helicase_RecD
CMS1
UvrD-helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDV38056
UniProt:
A0A518HBF7
LinkDB
All DBs
Position
complement(7341889..7343100)
Genome browser
AA seq
403 aa
AA seq
DB search
MIQRAVEEPEIDFSDLGLSPEMLEALRRIRYITPSPIQAAVIPEALDGSDIIGQAKTGTG
KTAAFGIPLIEMLEERGKGPQALILAPTRELAQQIVAEMDNLAANRDVAICAVYGGQPIE
KQLRALQRGVDIVVGTPGRVIDHIRRGTLYLGDVVHVVLDEADRMLDIGFRPDIEKILRR
VPDPHQTLLLSATIEPEIRRLADKYMFEPVEMLLSKDEPSAETVNQFYVTVDQDKKTELL
VHLLQREQPEQCLVFTRTKRGADKLADRIRRVVKGVAVIHGDLPQTSRDKVMKAFRTGEI
PVLVATDVVGRGIDVDGISHVVNYDIPEDPENYVHRIGRTGRMGRNGVAYLFVTPDQGDP
LTNIEMLMNRTIPPLDLGDYEAHNASVKAEQKRGAFKELFSYL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttgatccagcgagccgttgaggagccggaaatcgacttctccgacctggggctcagcccc
gagatgctcgaagccttgcgacgcatccgctacatcaccccttctccgatccaggccgcc
gtcatccccgaggcgctggacggcagcgacatcatcggccaggccaagaccggcaccggc
aagacggccgccttcggcatcccgctgatcgagatgctggaagagcgcggcaagggcccc
caggccctgatcctcgcgccgacccgggaactggcccagcagatcgtcgccgagatggac
aacctcgcggccaatcgcgacgtggccatctgcgccgtctacggcggccagccgatcgag
aagcagttgcgggcgctgcagcgcggcgtcgacatcgtcgtcggcacccccggtcgggtc
atcgaccacatccgtcgcggcaccctgtacctcggcgacgtcgtgcacgtcgtcctggac
gaggccgaccgcatgctcgacatcgggttccgccccgacatcgagaagatcctccgacgg
gtccccgacccgcaccagacgctgctgctctcggccaccatcgagccggagatccgccgc
ctggccgacaagtacatgttcgagcccgtcgagatgctcctctccaaggacgagccgtcg
gccgagaccgtcaaccagttctacgtcaccgtcgaccaggacaagaagaccgagctgctg
gtccacctgctccagcgtgagcaacccgagcagtgcctcgtcttcacccgcaccaagcgc
ggggccgacaagctggccgaccgcatccgtcgcgtcgtcaagggcgtggccgtgatccac
ggcgacctgccccagacctcccgcgacaaggtgatgaaggccttccgcacgggggagatc
cccgtcctggtggccaccgacgtggtcggccggggcatcgacgtcgacggcatcagccac
gtcgtcaactacgacatcccggaggacccggagaactacgtccaccggatcggccggacc
ggccggatgggacgcaacggcgtcgcctacctgttcgtcacccccgatcagggcgatccg
ctgaccaacatcgagatgctgatgaaccggaccatccctccgctggacctcggcgactac
gaggcccacaatgcctcggtcaaggccgagcagaagcggggcgccttcaaggaattgttc
agctacctctga
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